Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01810 ATGGGAGTCATCCCCACATTCGTGATATTATTATTAGATGCAAGGCTCTTTTGTCTTGTGAGGGTAAAAGAGCAGCTTCTAAAGGGCCTCCCAACAAGGGGAAAAAAAAGGTACTTCCCTTTTAGTTCATCTGATCAAAGAAACCTATACATCACAAACAGGGAAATCAGAAAAGAAAGAAAAGAAAAAAAAAAACAAATGGCATCATCAAGCTCCTACAATTCTCCATGTGCAGCCTGCAAATTCTTGAGGAGGAAGTGCCTTCCCGGGTGCATCTTTGCACCTTACTTCCCACCAGAAGAGCCTCAAAAATTCGCCAACGTGCACAAGATCTTCGGTGCCAGCAATGTGACGAAGCTCCTCAATGAACTTCTCCCTCACCAGAGGGAAGATGCAGTGAACTCTCTTGCATATGAAGCCGAGGCACGCGTGAGAGACCCCGTTTATGGTTGCGTAGGTGCCATATCTTTCCTCCAGAGACAAGTCCAAAAGCTCCAGAAGGAGCTTGATTCCGCAAATGCTGATCTCCTTCGCTTTGCCTGCAATGACATGCCTCCACCCTCTCTTTCTGTGCCACCACAAATCCCCCAAAGGTCTTTTAGTGCAGGGTTTGGTAATAATAATGAATCAGCAAGTGGAGGAGAGTTCTATAGGCCTTCTCCTACCACCACTTACTCTTACCCTTATTCTCTTCCATGGACTGATACCTCTTCTGAGGATATCAATGATGGAGGAGGTAACTTGTGA 747 0.4552 MGVIPTFVILLLDARLFCLVRVKEQLLKGLPTRGKKRYFPFSSSDQRNLYITNREIRKERKEKKKQMASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQKLQKELDSANADLLRFACNDMPPPSLSVPPQIPQRSFSAGFGNNNESASGGEFYRPSPTTTYSYPYSLPWTDTSSEDINDGGGNL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01810 248 Coils Coil 155 182 - -
Gma04g01810 248 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 67 244 - -
Gma04g01810 248 MobiDBLite consensus disorder prediction 52 67 - -
Gma04g01810 248 MobiDBLite consensus disorder prediction 52 74 - -
Gma04g01810 248 ProSiteProfiles LOB domain profile. 75 176 IPR004883 -
Gma04g01810 248 PANTHER ELONGATED PETIOLULE 1 67 244 - -
Gma04g01810 248 MobiDBLite consensus disorder prediction 229 248 - -
Gma04g01810 248 Pfam Lateral organ boundaries (LOB) domain 76 173 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01810 Gma-Chr4 48172079 48174576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01810 67 248 AS2 family AT5G63090 61.307 6.08e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma04g01810 LOB 8.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01810 - - gmx:100800614 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01810 04 48172079 48174576 Gma04g01810 04 48172079 48174576 ECH
Gma17g00812 17 6806434 6807003 Gma04g01810 04 48172079 48174576 PCT
Gma05g00387 05 3636254 3636820 Gma04g01810 04 48172079 48174576 PCT
Gma04g01810 04 48172079 48174576 Gma17g00812 17 6806434 6807003 PCT
Gma04g01810 04 48172079 48174576 Gma05g00387 05 3636254 3636820 PCT