Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01786 ATGCAGAGCGCGGCTTTCACTTTCTCTCCCTCTCTCCCTCTCCGCAACCCTTCCCCTAACTATTGGAGGAGACCTTCTCTCTCCCTCCGTCTCTCGGCCAAACACGGCAACAGCAACAGCGATGACGTGAACTCCAATGGCGTTTCTTCAACTTTCTTCACTCGCCGATCTTGGACTCTTCCTCCTTCCTCTTCCTTCAAGTTCAGGCCTCTCCCTCCCCGCGCCGCCGAAAGCGCCGTTCCCGAAAGTGCGCCCGTCGAAAACCCGCTCTTCAAAACTCTCGAACTCGGCGCCTTGTTTGGCCTCTGGTACCTcttcaacatctacttcaacatctacAACAAACAGGTGTTGAAGGCGTTTCATTACCCGGTAACTGTGACTGTTGTTCAGTTTGCTGTTGGGACTGTGCTCGTGGCATTTATGTGGGGTTTGAATCTCTATAAGAGGCCTAAACTCAGTGGTGCTATGCTTGGAGCGATTTTGCCGCTGGCTGCAGTGCATACTTTGGGGAACCTTTTCACTAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTCACTCACACTATCAAAGCCATGGAGCCTTTCTTTTCAGTGGTCCTTTCTGCCATGTTCCTTGGAGAGTTTCCTACACCGTGGGTGGTTGGTTCTCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCATCTGTTACAGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCATCCAATGTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGGCCATGGTTAATAAAGAGGATTCTATGGACAACATTACTCTCTTCTCTATCATAACAGTAATGTCCTTCTTCTTGTTAGCACCTGTGGCTATCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACTTGCAATCTGCTGGGGTGAATGTTAGACAACTTTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCGTATCAACAAGTTTCTTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCCGTGGGCAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCACCTGTGAATGCTTTTGGAACTGCTATAGCTCTTGCTGGCGTTTTCCTCTATTCAAGGGTGAAGCGTATTAAGGCAAAGCCAAAAACAGCTTAA 1191 0.4685 MQSAAFTFSPSLPLRNPSPNYWRRPSLSLRLSAKHGNSNSDDVNSNGVSSTFFTRRSWTLPPSSSFKFRPLPPRAAESAVPESAPVENPLFKTLELGALFGLWYLFNIYFNIYNKQVLKAFHYPVTVTVVQFAVGTVLVAFMWGLNLYKRPKLSGAMLGAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEFPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKAMVNKEDSMDNITLFSIITVMSFFLLAPVAIFMEGVKFTPAYLQSAGVNVRQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALAGVFLYSRVKRIKAKPKTA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01786 396 PANTHER SOLUTE CARRIER FAMILY 35 92 369 - -
Gma04g01786 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 230 - -
Gma04g01786 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 283 387 - -
Gma04g01786 396 Pfam Triose-phosphate Transporter family 95 384 IPR004853 -
Gma04g01786 396 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 92 369 - -
Gma04g01786 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 94 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01786 Gma-Chr4 47805045 47808796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01786 1 396 Antiporters AT5G33320 70.702 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01786 K15283 - gmx:732612 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01617 06 15882815 15887707 Gma04g01786 04 47805045 47808796 ECH
Gma04g01786 04 47805045 47808796 Gma04g01786 04 47805045 47808796 ECH
Gma04g01786 04 47805045 47808796 Gma06g01617 06 15882815 15887707 GST
Gma17g00831 17 7016950 7021585 Gma04g01786 04 47805045 47808796 PCT
Gma04g01786 04 47805045 47808796 Gma17g00831 17 7016950 7021585 PCT