Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01781 ATGGAACAATTTGAATACACTCTGTTGGGCAATTGGTTCTATATCAGGTTCCATGATGGAAGAACAGATCCAGCTGCCTATCCAAATGCTTTGTTAGCAAAAGTTTTAATTGATCAGATTGACAGGAAACTGGTCAAACAGACAGTGAGGACTTCAGTTTATGGTGTTACCTTTGTTGGGGCACGAGAGCAAATCAAGAGAAGATTAGAGGAGAAAGGTCTTATTACTGATGAAAAACTTTTATTTGCTGCAGCTTGCTATGCTGCTAAAGTGACATTAATTGCGCTTGGAGAAATTTTTGGTGCTGCACGTGTCATTATGGGTTGGCTTGGTGATTGTGCAAAGGTAATTGCTTTTGAAAACCAGCCTGTTCGTTGGACCACTCCTCTTGGCCTTCCAGTTGTACAACCATACTGTAAAACTGAACGGCATCTGGTTGAAGCTGTAGCAGTTCAATTGACTCAAAGGGAAGGGGAATTAATACAAGAGAAGTCTGAGGTGAAGAAGCTAACAAATTTTCTTAAGCAGTTTAGGCTGGCCTATGTTTCTCCTGAGTCAACAGTGGTTGGTGCTGGACATTTAGTTGATCATCCTAAGAAAATTGCTCTTCATTACTTGAAGGCTCAAGATCTGAGGGAAAGAGTAATTGAACATGTTGTCCACGATGATGGTGTTGCACCTTATAATGTGTTACTCTACAATGATAAACCAAGACTGGGAACTGCTGAAAGCCACACAGGAGCTAGAACAACATTTGGAAGAAGGACCGAATGCCAGGGACTGAATGGAACGCGCTTCACTGCCAACATGCACAATGTCTCGTTTGTTCTCCCCAATAACATTTCAAACTTGCAAGCTCATCACCTTGGAGTGCAAGGATCGAGGGTGCATATTGTGTTGCAGGATACTAGCATTGTGACCCCTGGGAACCACCCCATTCACCTTCATGGGTATGATTTCTACATCGTGGTGGAGGGGTTTGGGAATTTCGACCCCAACAAAGATACTTCCAAGTTCAACCTTGTTGATCCACCTATAAGGAACACTGTGGCTGTGCCAGTCAATGGATGGGCAATTATCAGATTTATTATTGACAACTCAGGTAAAATTAATTAG 1116 0.4238 MEQFEYTLLGNWFYIRFHDGRTDPAAYPNALLAKVLIDQIDRKLVKQTVRTSVYGVTFVGAREQIKRRLEEKGLITDEKLLFAAACYAAKVTLIALGEIFGAARVIMGWLGDCAKVIAFENQPVRWTTPLGLPVVQPYCKTERHLVEAVAVQLTQREGELIQEKSEVKKLTNFLKQFRLAYVSPESTVVGAGHLVDHPKKIALHYLKAQDLRERVIEHVVHDDGVAPYNVLLYNDKPRLGTAESHTGARTTFGRRTECQGLNGTRFTANMHNVSFVLPNNISNLQAHHLGVQGSRVHIVLQDTSIVTPGNHPIHLHGYDFYIVVEGFGNFDPNKDTSKFNLVDPPIRNTVAVPVNGWAIIRFIIDNSGKIN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01781 371 Gene3D - 18 173 - -
Gma04g01781 371 PANTHER DNA-DIRECTED RNA POLYMERASE 18 164 - -
Gma04g01781 371 SUPERFAMILY Cupredoxins 266 368 IPR008972 -
Gma04g01781 371 Pfam Multicopper oxidase 278 369 IPR011706 GO:0005507|GO:0016491
Gma04g01781 371 SUPERFAMILY DNA/RNA polymerases 26 158 IPR043502 -
Gma04g01781 371 PANTHER DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL 18 164 IPR002092 GO:0003677|GO:0003899|GO:0006351
Gma04g01781 371 Pfam Coiled-coil regions of plant-specific actin-binding protein 145 176 IPR032009 -
Gma04g01781 371 Gene3D - 250 371 IPR008972 -
Gma04g01781 371 Pfam DNA-dependent RNA polymerase 31 171 IPR002092 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01781 Gma-Chr4 47654732 47667273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01781 161 209 Ion Channels AT3G17700 63.265 2.00e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01781 K10908 - gmx:100779299 248.44