Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01761 ATGGAAATTGTGATTTCCTTGATCATACTCTTTGTGGGGATAGCAATTTTGGTGGTCATCCATGTCTGCGTCGTGGGGAGGGCCTTCAGAGGGAACAACAACGAAGAAGAAGAAGAAGGTACTCATCGCAGCATCAATGCCATGAAGAGAATGTTTGGCGGCGACAGCGTTGGTGACCTGAAAAACCTTCCTTGCTTTCCTTATGAAGAGCCAAAAGAGAGTACTAAAGGGTGTTGTGGCCTAGTGGATTGTGCTGTTTGCTTGGAGAATTTCAAGGTTGGTGATGTGTGCAGATTATTGCCCAATTGCAGCCACAGCTTCCATGTGCAGTGTATAGACTCATGGATACTGCAGACACCCGTTTGTCCCATTTGTAGAACATGGGTTCATTCACCAGTTGTGAGGGAACAAAGTGCTGTTTCTGAAAGTTTAGAAATTGTAACGGAATAG 450 0.4511 MEIVISLIILFVGIAILVVIHVCVVGRAFRGNNNEEEEEGTHRSINAMKRMFGGDSVGDLKNLPCFPYEEPKESTKGCCGLVDCAVCLENFKVGDVCRLLPNCSHSFHVQCIDSWILQTPVCPICRTWVHSPVVREQSAVSESLEIVTE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01761 149 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 147 - -
Gma04g01761 149 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 147 - -
Gma04g01761 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 133 IPR013083 -
Gma04g01761 149 SUPERFAMILY RING/U-box 83 132 - -
Gma04g01761 149 SMART ring_2 84 125 IPR001841 -
Gma04g01761 149 Pfam Ring finger domain 83 126 IPR001841 -
Gma04g01761 149 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01761 Gma-Chr4 47092199 47092667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01761 42 129 C3H Transcription Factor Family AT4G28890 39.773 7.59e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01761 - - gmx:102662620 292.352