Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01756 ATGGTGGCCAGGTCATGCTTGAATTTGTTGGATCTGGTATCAGGGGATACGCTAAATTTCCCTCGGACTCCCAGATCCCTTCCGCGAGTTATGACTGATCCAGTAATCATGTCTGATGGAGATGTTAAAGAAAGTAATGATGATGATTCGAGTTTTTTCTCATCAGAACACCATCGGAAGATAATTATAGTATCAAATTCTCTCCCTCTCAATGCAAAAAGGGATAAAATATCTGGCAAATGGTGCTTCAGTTATGACGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTTTATGTGGGATCTCTCAAGGTTGATGTTGATGCAAATGAGCAAGAGAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAATTGCGTGCCTACTTTTATTCCTTCAGACCTCTACAAACAATTCCATGATGGTTTCTGCAAGCAACAATTGTGGCCTCTATTCCATTACATGATGCCCGTGTATCCAGGCAATCGCCACTTTGATAGGTCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTCATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCAACATTTCTGCGAAAGCGGTGTAGTCGAGTCAGGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAGTTTATAAAACTCTGCCTGTCAGAGGTGAAATTTTGAAAGCATTGCTTAATGCAGATTTAGTTGGTTTCCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTTTGGCCGTACAATATTCATTAAAATATTGCCTGCGGGGATTCACATGGGTCGACTTCAATCAACCTTAGATCACCCTTCCTCTTCCAACAAAGTCAGAGAAATCCACCAACAATTTAAAGGGAAAAAGCTTATAGTTGGTGTTGATGATATGGACTTATTCAAAGGTATCAGTTTAAAATTCTTGGCCATAGAGAAACTCCTGCAGCAATATCCAGAACGGCAAGGTGAATTAATATTGATCCAAATTTTAAATCCCCCAAGTAGTTCTGACAAAGATGTTGAGGATGCAAAGGAGGATGCCTACATTACAGCCCAAAGGATAAATGAAAGGTTTGGTTTGGAAGGTTATGAACCTATCATCATCATTGATTGCCATGTTCCTTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTGCGTGATGGTTTGAATTTGGTTCCATACAGGTACACTGTGTGTAGGCAGGGAAGTTCTAAACTAGACGAAGCTTTAGAAATTGCTTCTGACTTCCCGCGTGTAAGTGCACTTGTCGTTTCTGAGTTTATAGGTTGCTCACCATCTCTTAGTGGGGCAATAAGGGTAAACCCATGGGATATTGATGCAGTAGCTGAAGCACTTAATTTGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAAAAGCACTATCGATATGTTAGTTCTCATGATGTGGCATACTGGGCTCGAAGCTTTGAGCAAGATCTAGTGTTCTCATGCAAGGATCACTATAGTAACCGATGCTGGGGCATTGGCTTTGGCCTGAATTTCAGAATTTTGTCCCTCTCTCCTAGTTTCAGGAGGCTATCCATAGACCACATTGTCCCTGCATATGAGAGGTGCAGTTGCAGGGCAATATTTTTGGATTATGATGGTACAGTTGTACCTGAAGCTTCCATTGTTAAAGCACCCAGTCCCGAAGTCATATCTGTGCTAAATAATCTCTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAACCTCACTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTCATAAGGTGGGGTAAACATACTAGTTGGCAAATGAGTCATGCAGATACAGATTTTGCATGGCAAAAGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGATGGTTCCTCTGTAGAGACCAAAGAGAGTGCCTTGGTGTGGCATTACCGTGATGCCGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGCTGGATCACCTTGAAAATGTACTTGCAAATGAGCCTGTTGTTGTAAAAAAAGGGCAACATATTATTGAAGTCAAGCCTCAGGGCATTACTAAAGGGTCAGTTGCACAGGAAGTTCTTTCTTCCCTAACCAAGAAGGGTAAATCGCCAGATTTTGTACTGTGCATTGGTGATGATAGATCTGATGAGGACATGTTTGAGAGCATACTAGCCAAACCTTATAGTGCTACCTCCTTCTCAGCACCACAAATATTTGCATGCACTGTTGGACAAAAACCGAGTAAAGCCAGGTACTACCTAGATGACACTGTGGATGTGATGACATTACTTAAGGGTCTTGGTGCGGCTTCAGGGCCTAAATCAAGATGCTCTACAGAAACCCCTTTTGAGAAAAGAGAAGTATGTTTTGAGAATGATGTTTAA 2598 0.4196 MVARSCLNLLDLVSGDTLNFPRTPRSLPRVMTDPVIMSDGDVKESNDDDSSFFSSEHHRKIIIVSNSLPLNAKRDKISGKWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDANEQEKVSLQLLEEFNCVPTFIPSDLYKQFHDGFCKQQLWPLFHYMMPVYPGNRHFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVRLGFFLHSPFPSSEVYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYFGRTIFIKILPAGIHMGRLQSTLDHPSSSNKVREIHQQFKGKKLIVGVDDMDLFKGISLKFLAIEKLLQQYPERQGELILIQILNPPSSSDKDVEDAKEDAYITAQRINERFGLEGYEPIIIIDCHVPFYEKAAYYALAECCIVNAVRDGLNLVPYRYTVCRQGSSKLDEALEIASDFPRVSALVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHYSNRCWGIGFGLNFRILSLSPSFRRLSIDHIVPAYERCSCRAIFLDYDGTVVPEASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKTSLSEWFDQCENLGIAAEHGYFIRWGKHTSWQMSHADTDFAWQKIAEPVMRSYMEATDGSSVETKESALVWHYRDADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIIEVKPQGITKGSVAQEVLSSLTKKGKSPDFVLCIGDDRSDEDMFESILAKPYSATSFSAPQIFACTVGQKPSKARYYLDDTVDVMTLLKGLGAASGPKSRCSTETPFEKREVCFENDV 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01756 865 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Gma04g01756 865 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
Gma04g01756 865 Gene3D Glycogen Phosphorylase B; 312 528 - -
Gma04g01756 865 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 792 IPR006379 -
Gma04g01756 865 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Gma04g01756 865 TIGRFAM T6PP: trehalose-phosphatase 591 836 IPR003337 GO:0003824|GO:0005992
Gma04g01756 865 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
Gma04g01756 865 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 543 - -
Gma04g01756 865 Gene3D - 673 753 - -
Gma04g01756 865 Gene3D Glycogen Phosphorylase B; 51 311 - -
Gma04g01756 865 CDD HAD_TPP 592 832 - -
Gma04g01756 865 SUPERFAMILY HAD-like 591 838 IPR036412 -
Gma04g01756 865 Gene3D - 593 825 IPR023214 -
Gma04g01756 865 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01756 Gma-Chr4 47032141 47035194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01756 1 863 Trehalose Biosynthesis Gene Families AT1G23870 64.088 0.0 1193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01756 K16055 - gmx:100787744 1692.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01647 06 16324548 16331766 Gma04g01756 04 47032141 47035194 ECH
Gma04g01756 04 47032141 47035194 Gma04g01756 04 47032141 47035194 ECH
Gma04g01756 04 47032141 47035194 Gma06g01647 06 16324548 16331766 GST
Gma05g00343 05 3188884 3191809 Gma04g01756 04 47032141 47035194 PCT
Gma04g01756 04 47032141 47035194 Gma05g00343 05 3188884 3191809 PCT