Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01747 ATGCTTGCATCATTCCTACAGATTGTCGGCCAGAACACTCGATATTGTGTAATCCGCAATACATTTGGCCGATCACAATTTGCTACAAGTGAAAATTTTCACAAGATTTTGAAAGCTCTGAACTCATTAGCACCTGATTTAATGGTTAGACCAGGCTCAACTGTGCCTGCAAAAATAAGGGAAAGCACAAGGTTTTATCCTTATTTTAAGTCAGCACCTCCATTTCTATTTAAAACACAAGCAGAGCTTGTGTTGGCATGTGCAGCACTTCATAATTTTCTTCGCAAAGAATGTCGTTCTGATGAATTTCCAGTGGAACCTACTGACGAGTCTTCATCTTCATCTTCAGTGTTACCAAATTACGAAGACAATGATCATGAACCCATTGTTCAAACACAAGAGCAGGAACGAGAAGATGCTAATATATGGAGGACTAATATAGCTCTTGTTCTTCTTTCAAGTCAAACGCTTCGAGGATTGCAATTTGAGGACTTGCTTGGTGCCCCTGCTGAATTGATTAGGAGGGGAAAGCATGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGCTGTTGGCAGTGAAGAGGATCAAGGATTGGGGGATTTCCAAGCAAGATTTTGAGAGAAGGATGAATTTGATAGCCCAAGTGAAGCATCCACGCGTATTGCCACCCGTTGCATACTATTGCTCTCAGCAAGAGAAGCTCCTAGCATATAAATATCTGCAGAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGGGAAGCAGACTAAATGTTGCTGCTAAGATAGCTGAGGCTTTGGCATATGTGCATGAGGAGTTTCTTGAGAATGGAATAGCACATGGTAACTTAAAGTCAAGTAACATTCTGTTTGTCCATTCTCACAACAAAGGTCTCAAAAGCAAAGATCTAATTGCATCCATCTTCAAAGCTGATGTACATGCCTTTGGTTCGATACTTCTCGAGCTGCTGACAGGGAAAGTAATTAAAAATGATGGATTTGATCTAGTCAAATGGGTGAATTCAGTGGTCAGAGAGGAATGGACTTTTGAAGTTTTCGACAAGTCCCTAATCTCACGAGGTGCTTCTGAAGAGAGAATGATGAGTTTGTTGCAGGTAGCACTAAAATGCGTTAATCCTTCTCCCAATGATAGGCCAAGTATGAGCCAAGTTGCAGAGATGACAAATTCTTTGATAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA 1260 0.4119 MLASFLQIVGQNTRYCVIRNTFGRSQFATSENFHKILKALNSLAPDLMVRPGSTVPAKIRESTRFYPYFKSAPPFLFKTQAELVLACAALHNFLRKECRSDEFPVEPTDESSSSSSVLPNYEDNDHEPIVQTQEQEREDANIWRTNIALVLLSSQTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQDFERRMNLIAQVKHPRVLPPVAYYCSQQEKLLAYKYLQNGSLFMLLYGSQSGHSFDWGSRLNVAAKIAEALAYVHEEFLENGIAHGNLKSSNILFVHSHNKGLKSKDLIASIFKADVHAFGSILLELLTGKVIKNDGFDLVKWVNSVVREEWTFEVFDKSLISRGASEERMMSLLQVALKCVNPSPNDRPSMSQVAEMTNSLIEEEEKSISFDT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01747 419 Gene3D Transferase(Phosphotransferase) domain 1 242 312 - -
Gma04g01747 419 Gene3D Phosphorylase Kinase; domain 1 140 241 - -
Gma04g01747 419 Gene3D Transferase(Phosphotransferase) domain 1 315 418 - -
Gma04g01747 419 SUPERFAMILY Protein kinase-like (PK-like) 171 403 IPR011009 -
Gma04g01747 419 PANTHER OS10G0387400 PROTEIN 134 418 - -
Gma04g01747 419 MobiDBLite consensus disorder prediction 103 124 - -
Gma04g01747 419 MobiDBLite consensus disorder prediction 107 121 - -
Gma04g01747 419 PANTHER OS05G0588300 PROTEIN 134 418 - -
Gma04g01747 419 ProSiteProfiles Protein kinase domain profile. 167 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01747 419 Pfam Protein kinase domain 173 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01747 Gma-Chr4 46912482 46923587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01747 162 403 Receptor kinase-like Gene Family AT5G05160 36.462 1.31e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma04g01747 Pkinase 8.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01747 - - gsj:114409807 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01747 04 46912482 46923587 Gma06g01649 06 16356071 16358454 GST