Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01744 ATGCATGGGCGTGGAGGTGAGAAGGGTAAGAGGACTCGGCACATGTGGAAATCCTCCACACGTGGCGACTCGTCTCTGAACGCCGATGTTTCTTCGTCTTCTTCTTCGTCGTCGTCGTCAGTGAAGTCGTTCTGTAAGGACGGTCGCAAAATTAGTGTTGGTGAATGTGCTCTCTTCAAACCATCTGAAGATCGCCCACCATTTATTGGTATAATTCGTTGTCTGACATTTGGCAAAGAGAAAAAATTGAAGGTAGGTGTTAGTTGGCTTTATCGATCCATTGAAGTAAAACTCAACAAGGGTGGACCATTGGTGGCTGCTCCAAACGAAATCTTCTACACCTTCCATAAGGATGAAATTGATGCTGAATCGCTGCTCCATCCATGTAAAGTTGCATTTCTTCGTAAGGGTGCTGAACTTCCATCAGGGATTTCTTCATTTGTGTGCAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGCTAAATGATCAAGATTATATTAATGATTGTCAAGAAGAAGTAGATCAACTATTATACAGAACTTGTGTAGGAATGCATGCAGCAGTGCAGCCAGGTGGCCGATCTCCTAAGCCAATGAGTAGTCCAACATCAACATCACAGTTAAAATCTGTTTCAGATAGTGTCCAGAACAGTACTTCTTCCTTTCCATCTCACATTAAGGGGAGGAAAAGGGAAAGGGCTGATCAAAGCTCTGAGCCTGCCAAGCGAGAACGATCAATAAAAACTGAGGATGGAGATTCTGGTCATTTCAGGCATGATAACATTTTGAAGACAGAGATTGCTAAAATTACAGAAAAGGGAGGGCTTGTTGACAATGAAGGAGTTGAAAAATTAGTGCAGCTGATGGTTCCTGAGAAAAATGAGAAGATAGATTTAGCTAGCCGGGCATTGCTTGCAGCTGTCATTGCAGCAACAGATAAATTAGATTGTCTTAGTCAGTTTGTGCAGTTGAGGGGCTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGGAAGATTGGTGATGGTGTTGGGTCTAGGGATGGTGATAAATCTGTTGAGGAATTTCTCTTGGTATTGCTTCGGGCACTTGATAAGCTTCCAGTAAATCTTCAGGCTTTACAAACATGCAACATTGGAAAATCTGTGAATCATTTGCGAACGCATAAAAACACTGAAATTCAGAGGAAAGCCAGAGGTTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAAAGATGCAAAGTCTGGTTCAGGTCCCACTGTCCACTGGTCTGCCAAATCGCGTTCTTCTGTTGTTGGTCAAGGTGGGAATAGACATTCAGGTGCATTATCTGATGTTGCCATGAAGAGTTCAGTTACACAGCTTTCTGCATCCAAAACTGCCTCTGTGAAGATTGTCCAGGGAGAGAATACTACTAGATCTGCATCGACATCCGCATTTCCTGGGCCTGCAAAATCAGTGCCATCACCTGCATCTGCGACTACAAACCTAAAAGATGGACAGCCCCGTATTGCCGCTGCCAATGGAGGTTCTGATCTTCCCATGGTGAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCACAACAACAGTCAATCGTGTTCTAGTGACCATGCTAAAACTGGAGGTCATTCAGGAAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGTGAATAAGATATCTGGAGGCTCTTCACGGCACCGAAAATCTATTAATGGATTTTCAGGTTCAACTCCATCCGTAGGGCAAAGGGAAACTGGATCAAGTAGGAATTCCCCCTTGCACAAAAATTTAACTTCAGAGAAAATATCTCAACCTGGATTAATGGAAAAGGCACTTGAGGGAGTTTCTTGTAAGCTGATTGTTAAAATTCCAAGCCAAGTTAGAAGTCCTGCTCAAAGTGCTAGTGCAGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCCTCATCTCCTGTCCTCCCGGAGAAGCATGATCAGTTTGATCAAAGCTCGAAGGAAAAGAGTGACCTTTATCGAGCAAATATTGTCTCAGATATTAATACTGAATCTTGGCAGAGTAATGATTTTAAAGACGTATTGACTGGCTCTGATGAGGCTGATGGATCACCTGCTGCAGTTACTGATGAAGAGCGCTGTCAGATTGGCAATGATTGCAAGAAAACATTGGAGGTACCAAAAGCCGCTTCCTCGTCATCTGGAAATGAAAATAAATCTGGAAATTTGCAGGATGCTTCTTACACCTCAATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAGGCTGATGATGTTGGAATGAATCTTCTTGCGAGTGTGGCTGCTGGAGAGATTTTGAAATCTGAATTGTTAACTCCAGCTGGATCTCCAGAAAGAAACACTACTGCTGTTGAACAGTCATGCACAGGCAATGGTGTTGTTAAGTCCTCTGAAGAGAATCTTGTCCGGGATGAATGCCACTCAAATAATGGTCTTGATGGTGAACATAAGAATCAGGGTTCTGTAACAGGTGATTTAGGGGTAAATGATGAAAGTGATTCTGATTTTCGAGCTTCTGAAGAGAAAGCTGCAAGAGAGCTAAATAAGTGTGTTAATGCATGTAGTATGGATTTGCAACAGGTTTCTGAAACTATTTTAGAAAGCAAAGGAAAATTAAACAAAAAATCTGTATCTACTGCATTGGGTGGCCTTTCTGAAAGTTCTGTACAAGAAGCTAGAGATGGTGACAGAAGCAAGCAGCTCCAGGAGGTTGGTCGGGGAGTGAATGCTGATGAAATTGTTGATGTTAAGGTCAGTTCTGTTGCAGAAGTTAAGGCAGAAGCAACTGAAAAATTGTCACATATAGCTGTGGAAGTGGATGTACAGAGTGATAACTGTACTACTGAAGTATCAACTGGTGGTGGACAGACAGCTGCTATTCTTGTTCAGTCTGATTCGGCAAGAGGAAAAGATGAGAATGTACTCCATTCTTCTGCTTATAGTGTTGATAAGGTTCCTGAAGACTTGACTGAACGGGAGTTTGAAAAAGCTGATGATGTTGATGCTGAGAATCATTCTAGTCAGTCTAAAAAGCAAAGAAATGAGTGTGAAAGTGATGCCTTGACAATGCCTGAGGATAGAGGTTTATGCTCTATTGTGACTGGTATTGCTGCTGAACATGTGGAGGAAAATTTAGAAACGAAAGAGGTTCATGACCAACCTGCCAGAGAGGAACTTCCCAAAGATTCACCTAGTGTCCTTTCACAAGAAATGGATAAGCATCTTGATTCTAAAGGGTCAAAATTGATTGCCATGGAAGCGGAGGAGGCTGAGGAGTGCACCTCTACCACTGCAGATGCTTCTTCCATGTCTTCTGCAGCTGTGTCAGATGCAGATGCTAAGGTTGAATTTGATTTAAATGAAGGGCTCAATGCAGATGATGGGAAAAGTGGCGAGTTCAACTGCAGTGCACCTGCTGGTTGTTTGGTCAGTCCTGTGCCGTTTCCTGCTTCATCTATGTCTTGTGGTATTCCTGCTCCTGTCACCGTGGCTGCTGCTGCAAAGGGGCCCTTTGTGCCTCCTGAAGATTTATTGAGAAGTAAAGGGGAAATTGGTTGGAAGGGATCAGCTGCCACTAGTGCATTTAGGCCAGCCGAGCCCAGGAAGGTTATGGAAATGCCTCTTGGTGCACTAACTACCTCTATACCTGATGCTCCAGCTGGAAAGCAGAGTCGAGCACCATTGGATATTGACTTGAATGTGGCTGATGAAAGAATACTTGATGATATTTCTTCTCAAACTTATGCTCGTCACACTGATTCTGCATCTCTTGCAACTGATGATCATGATCCTGTATGCAGTAAAATGTCTTCACCTCTTCGCTGCTCTGGAGGGCTTGGTCTTGACTTGAACCAAGTGGATGAAGCTTCTGACGTGGGCAATTGCTTGAGCAGTAATCATAAAATTGATGTGCCAATTATGCAGGTGAAGCCATCATTGGGTGGTCCACCAAATCGAGAAGTGAATGTCCACAGGGACTTTGATTTGAACAATGGACCTTCAGTTGATGAAGTCACCACTGAATCCTCATTGTTTTCTCTGCATGCCAGGAGCAGTGTGCCATCTCAACCGCTTGTTTCTGGACTTAGGGTGAGTACTGCTGAGCCAGTCAACTTCTCTTGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCATCCCTTTTCAATTGTTGCCCCAAATGGGCCACAAAGGTTGTTGACTCCTGCTGCTGGTGGCAACCCATTTGGACCTGATATTTATAGGGGGCCAGTATTGTCATCTTCTCCTGCAGTGTCATATGCATCTGCTCCATTTGAATATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCAGCTTCTTTTTCTTCTGGATCAACTACGTATGTATATCCAACATCAGGCAATCAGCTTTGCTTTCCTGCGGTAAATTCACAGTTAATGGGGCCTGCTGGTGCAGTTTCATCTCATTATCCCAGGCCTTTTGTTGTTGGCCTTGCAGAAGGTAGCAATAGTGGTAGTGCCGAGACCAGTAGAAAATGGGCAAGGCAGGGTTTAGATCTTAATGCAGGACCTGGAGGTTCAGATGTGGATGGGAGAGACGGGAATTCTCCTCTTCCATCTAGGCAACTTTCTGTTGCTAGTTCACAGGCCCTAGCTGAGGAGCAAGTAAGGGTCCAGCTGGCTGGTAGTGTTCGTAAGAGGAAGGAGCCTGATGGTGGGTGGGATGGCCACAACCAATCCTCATGGCAATAG 4851 0.4381 MHGRGGEKGKRTRHMWKSSTRGDSSLNADVSSSSSSSSSSVKSFCKDGRKISVGECALFKPSEDRPPFIGIIRCLTFGKEKKLKVGVSWLYRSIEVKLNKGGPLVAAPNEIFYTFHKDEIDAESLLHPCKVAFLRKGAELPSGISSFVCRRVYDIANKCLWWLNDQDYINDCQEEVDQLLYRTCVGMHAAVQPGGRSPKPMSSPTSTSQLKSVSDSVQNSTSSFPSHIKGRKRERADQSSEPAKRERSIKTEDGDSGHFRHDNILKTEIAKITEKGGLVDNEGVEKLVQLMVPEKNEKIDLASRALLAAVIAATDKLDCLSQFVQLRGLPVFDEWLQEVHKGKIGDGVGSRDGDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNTEIQRKARGLVDTWKKRVEAEMNIKDAKSGSGPTVHWSAKSRSSVVGQGGNRHSGALSDVAMKSSVTQLSASKTASVKIVQGENTTRSASTSAFPGPAKSVPSPASATTNLKDGQPRIAAANGGSDLPMVNARDEKSSSSSQSHNNSQSCSSDHAKTGGHSGKEDARSSTAMSVNKISGGSSRHRKSINGFSGSTPSVGQRETGSSRNSPLHKNLTSEKISQPGLMEKALEGVSCKLIVKIPSQVRSPAQSASAGSFDDPTIMNSRASSPVLPEKHDQFDQSSKEKSDLYRANIVSDINTESWQSNDFKDVLTGSDEADGSPAAVTDEERCQIGNDCKKTLEVPKAASSSSGNENKSGNLQDASYTSINALIEGVKYSEADDVGMNLLASVAAGEILKSELLTPAGSPERNTTAVEQSCTGNGVVKSSEENLVRDECHSNNGLDGEHKNQGSVTGDLGVNDESDSDFRASEEKAARELNKCVNACSMDLQQVSETILESKGKLNKKSVSTALGGLSESSVQEARDGDRSKQLQEVGRGVNADEIVDVKVSSVAEVKAEATEKLSHIAVEVDVQSDNCTTEVSTGGGQTAAILVQSDSARGKDENVLHSSAYSVDKVPEDLTEREFEKADDVDAENHSSQSKKQRNECESDALTMPEDRGLCSIVTGIAAEHVEENLETKEVHDQPAREELPKDSPSVLSQEMDKHLDSKGSKLIAMEAEEAEECTSTTADASSMSSAAVSDADAKVEFDLNEGLNADDGKSGEFNCSAPAGCLVSPVPFPASSMSCGIPAPVTVAAAAKGPFVPPEDLLRSKGEIGWKGSAATSAFRPAEPRKVMEMPLGALTTSIPDAPAGKQSRAPLDIDLNVADERILDDISSQTYARHTDSASLATDDHDPVCSKMSSPLRCSGGLGLDLNQVDEASDVGNCLSSNHKIDVPIMQVKPSLGGPPNREVNVHRDFDLNNGPSVDEVTTESSLFSLHARSSVPSQPLVSGLRVSTAEPVNFSWLPSSGNTYSAVTISSIMPDRGDHPFSIVAPNGPQRLLTPAAGGNPFGPDIYRGPVLSSSPAVSYASAPFEYPVFPFNSSFPLPSASFSSGSTTYVYPTSGNQLCFPAVNSQLMGPAGAVSSHYPRPFVVGLAEGSNSGSAETSRKWARQGLDLNAGPGGSDVDGRDGNSPLPSRQLSVASSQALAEEQVRVQLAGSVRKRKEPDGGWDGHNQSSWQ 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01744 1616 ProSiteProfiles BAH domain profile. 49 164 IPR001025 GO:0003682
Gma04g01744 1616 MobiDBLite consensus disorder prediction 191 260 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 640 681 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 527 551 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 799 866 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 477 618 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 419 451 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 1 43 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 705 724 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 477 510 - -
Gma04g01744 1616 Pfam TFIIS helical bundle-like domain 364 413 IPR017923 -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 559 616 - -
Gma04g01744 1616 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1616 - -
Gma04g01744 1616 SMART TFS2_5 336 415 IPR003617 GO:0005634
Gma04g01744 1616 MobiDBLite consensus disorder prediction 227 260 - -
Gma04g01744 1616 Gene3D - 31 274 IPR043151 -
Gma04g01744 1616 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 288 417 IPR035441 -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 1550 1616 - -
Gma04g01744 1616 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 318 427 IPR035441 -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 1593 1607 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 1570 1587 - -
Gma04g01744 1616 ProSiteProfiles TFIIS N-terminal domain profile. 339 416 IPR017923 -
Gma04g01744 1616 CDD TFIIS_I 338 414 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 824 838 - -
Gma04g01744 1616 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1616 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 1071 1085 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 1022 1048 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 1071 1095 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 198 226 - -
Gma04g01744 1616 SMART BAH_4 49 164 IPR001025 GO:0003682
Gma04g01744 1616 MobiDBLite consensus disorder prediction 19 43 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 640 663 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 800 822 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 839 854 - -
Gma04g01744 1616 MobiDBLite consensus disorder prediction 429 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01744 Gma-Chr4 46894797 46901893 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gma04g01744 Med26 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01744 - - gmx:100780436 3076.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01651 06 16373401 16380199 Gma04g01744 04 46894797 46901893 ECH
Gma04g01744 04 46894797 46901893 Gma04g01744 04 46894797 46901893 ECH
Gma04g01744 04 46894797 46901893 Gma06g01651 06 16373401 16380199 GST