Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01721 ATGTCAGCACCTAGTCATGCAATTGTAAAGGCTGTGGCTGCCACAGCTGGTGCTATGTTACTTATTGCTGCGATATTTGTTTACCTTTTTTACAAACATGTTCTTGCTAGATACCACCAGAGACACAAAGTTGGTGCAAGTTTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGACTAATTGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGATGGACACAGAAAGAAGGCCATTGATTACTGGTTTCTCTAACAGTATATTCAATCCAAGTTATGAACATGATGAGGAAGAAAAGAGAATAGATATAATGGTCCAAAGGTCCAAAGTATCCAAGCCTGAAATTCCACAGGCATGTGAATCTCCAAGTGTTGTTGGTCATGAGAATCAAGTTAAGCCAGTGTCACAAACATCATCAGTTTCAACATCACTAGCACCAAGACAAAACTTGCCACAATCACCTCAGCTAGCACCTCCACTTCAACCACTTCCACAATCTTCACCAATGATTCTTGAGAACAAGAAAACTCAACCATCATCACCACCAcctcctcctcctcctcctcctcctcctccAACTCGCCCTCCGCCACCACCACCTGGTCCACCTCCACTTCCTAAAGCCAGTGGCTTCATTTCATCCCTGAAACCCCCACCCGCTCCCAAAGGGAAAACAAACATAAGAAGCACTAAAGAGGGTATGATAGGGGAGAGTTCAAGAGAGAAGGGTGTTGGTCAAACAAGGCTGAAGCCTCTACATTGGGATAAGATTGTAGCAAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCAGGTTTGATGATGAACTAATTGAATCACTCTTTGGATATTCAAGCAGCTACAAAACCCAAGAAAGAAACAGAACACTTTCCACTTTGGCCAAGTCCAATTCCAATGCGCCAACTCAAATATTCATTCTTGAGCCAAGAAAATCTCAAAACACAGCAATTGTGCTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGAAGCAGTTCTTGATGGTCAGGGACTAAGTGTTGAGACACTAGAAAGGCTCAGTAAAATAGCCCCCACCCAAGAAGAGGAAGCCAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTCGCCGATGCTGAGTCTTTCCTATACTACATTCTTAAATCAGTTCCTACAGCATTCAACCGTTTGAAAGCCATGCTTTTCAGGTCGAGTTACGATTGCGAAGTTCTGCAGCTCAAGGAACACCTACAAACACTTGAAATGGGTTGCAAGGAGCTGAGAACTAGTGGCCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAAGCCGGGAACCGGATGAATGCCGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGTTCTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAATCAGAAGGAAAAAGACAAGCAATCTATCAAAAGCACAAACTTCACATAAGCAATGGTGAAACAAGCAATGTGAATAGACCTTATTCATATAGCCTCATACAACAAGAGGCAGAAAAAGAATATGTAATGCTTGGTTTGCAAGTGTTAGGTGGGCTAAGTGAAGAGTTGTCTGAAGCAAAGAAAGCAGCTAGTATTGAGTATCATAATTTCATCACTATGTGTTCAACTCTCAATGCTCATGTTAGTGAAATTAGACAGATTATAACTTGCTGTGGCAACACTAGAAGTGGCGAATTTATCAATGAAATGAAAGGGTTCCTAGAGGAATGTGAGGGAGAACTTGAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAGAAAACAAACGAGTACTATCTAGCAGGAGCATCCAAAGACAACATGGTAAATCCTTTTCAACTGTTTGTTATTGTAAAAAGTTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTAAAAAACAAGGTAGAAAAGAAGAATATTGTGGGAGGAGAGGCTGTGTCAACAACACCACCTTTGTCACCATCAAAGAGGACGCCACTCAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATGTGTCAGAATCTACATCTTCTAGCCAATCAGAAGATGATTTCTGA 2184 0.4093 MSAPSHAIVKAVAATAGAMLLIAAIFVYLFYKHVLARYHQRHKVGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFSNSIFNPSYEHDEEEKRIDIMVQRSKVSKPEIPQACESPSVVGHENQVKPVSQTSSVSTSLAPRQNLPQSPQLAPPLQPLPQSSPMILENKKTQPSSPPPPPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPAPKGKTNIRSTKEGMIGESSREKGVGQTRLKPLHWDKIVANVDHSTVWDQINDGSFRFDDELIESLFGYSSSYKTQERNRTLSTLAKSNSNAPTQIFILEPRKSQNTAIVLRSLAISRKGILEAVLDGQGLSVETLERLSKIAPTQEEEAKIIQFSGNPDQLADAESFLYYILKSVPTAFNRLKAMLFRSSYDCEVLQLKEHLQTLEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSSLRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAIYQKHKLHISNGETSNVNRPYSYSLIQQEAEKEYVMLGLQVLGGLSEELSEAKKAASIEYHNFITMCSTLNAHVSEIRQIITCCGNTRSGEFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNEYYLAGASKDNMVNPFQLFVIVKSFVDMVDQACIELKNKVEKKNIVGGEAVSTTPPLSPSKRTPLRFPNFDLYFLSNVSESTSSSQSEDDF 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01721 727 Coils Coil 604 624 - -
Gma04g01721 727 PANTHER FORMIN-LIKE PROTEIN 2 723 - -
Gma04g01721 727 SMART it6_source 251 680 IPR015425 -
Gma04g01721 727 SUPERFAMILY Formin homology 2 domain (FH2 domain) 205 679 - -
Gma04g01721 727 Pfam Formin Homology 2 Domain 256 665 IPR015425 -
Gma04g01721 727 PANTHER FORMIN-RELATED 2 723 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma04g01721 727 Gene3D Formin, FH2 domain 271 682 IPR042201 -
Gma04g01721 727 MobiDBLite consensus disorder prediction 187 217 - -
Gma04g01721 727 MobiDBLite consensus disorder prediction 122 257 - -
Gma04g01721 727 MobiDBLite consensus disorder prediction 138 161 - -
Gma04g01721 727 ProSiteProfiles Formin homology-2 (FH2) domain profile. 249 691 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01721 Gma-Chr4 46519116 46521561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01721 223 725 FH2 protein (formin) Gene Family AT1G70140 46.047 9.39e-147 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01721 - - gsj:114409782 1283.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01672 06 16673772 16676215 Gma04g01721 04 46519116 46521561 ECH
Gma04g01721 04 46519116 46521561 Gma04g01721 04 46519116 46521561 ECH
Gma04g01721 04 46519116 46521561 Gma06g01672 06 16673772 16676215 GST