Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01718 ATGGAGATTAGTGATAATGATGCTAATGTAACTACTCCATCAAAAGGCTTAAATGATCACGTGTACACATTACAAAGATGGGTTCCCAAGTGTGATCaacaactcaagcctgtagttggcaacgtgtttgatactttagaagagggcaacaacttttatacaacgtatgcacttgaagttggtttcaatatatgcagatcaattgaagtgaaatataaggatggggaaataaagtttaaatattatgtttgctcaagacaaggcttcaaagaagaaaatagaaggactataagtgtgatgcttgttgatgaaaaaagaatgccaaaaaccagacggagaaaagaaacaagggaagagttttttcgattttatgaaggtcataaacatgcattagccacacctacaaagaagcaatttcttaaatctgcaagaaatgtaaacaatgttcataagaatttattgctttgctttgataaagctaatgtagtgccttcaaaagcttgtcagataatgaatagcaagaaggttttcacaagcgtttcacccaaattttgtatatggcacattcttaaaaaactttcagagaagctaagggcttccttgaatgccaatactgattttcatagtcattttaagtcttgtgtttcgaatttagagtcttcaaaagaatttgaactgacatggaaagctattatttgtgattttaatatgtggatatctacttatttcaaagatacatttttggttggaattttgagaacaacctcaagatctgagagtgaaaattcattatttggtaattacttgaataagaaccttagtttggtagaattctggatgagattcaattctgcaatagaatcacaaaggcacacagaactacttgtagataatgtcacacttaatactatgcctgaattgaagttacatagtgatatagaaaagcacggcagagaagtttacactcatgaaaatttGACATTTTTCAAAATGAGTTATGGAATGCATGTGCGCATTGTGGGATTGAAGAAACAAAAGAGGACAATTGGGCAATTATTAATTTTTATACTTGACCATATTATGGTTAATGGTAGCAAAGTTAGGAAAATGAAGGAAGTTGCTTATAATTCTTCCAATCATATTACACATTGCTCTCATAAAAAGTTTGAATCTGAAGGCATTCCAT 1186 0.0868 MEISDNDANVTTPSKGLNDHVYTLQRWVPKCDQQLKPVVGNVFDTLEEGNNFYTTYALEVGFNICRSIEVKYKDGEIKFKYYVCSRQGFKEENRRTISVMLVDEKRMPKTRRRKETREEFFRFYEGHKHALATPTKKQFLKSARNVNNVHKNLLLCFDKANVVPSKACQIMNSKKVFTSVSPKFCIWHILKKLSEKLRASLNANTDFHSHFKSCVSNLESSKEFELTWKAIICDFNMWISTYFKDTFLVGILRTTSRSESENSLFGNYLNKNLSLVEFWMRFNSAIESQRHTELLVDNVTLNTMPELKLHSDIEKHGREVYTHENLTFFKMSYGMHVRIVGLKKQKRTIGQLLIFILDHIMVNGSKVRKMKEVAYNSSNHITHCSHKKFESEGIP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01718 395 Pfam FAR1 DNA-binding domain 51 117 IPR004330 -
Gma04g01718 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 143 IPR031052 GO:0006355
Gma04g01718 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 171 331 IPR031052 GO:0006355
Gma04g01718 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 171 331 - -
Gma04g01718 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 29 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01718 Gma-Chr4 46433732 46435464 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma04g01718 FAR1 5.9e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01718 - - lja:Lj0g3v0232569.1 288.885