Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01700 ATGGAGCTGGTTCTGCAATACTTGAAGCGCAAGGTCTTCTCTTACCCTTTGCCAGCCTCTATCATTCCTGAGCTTCATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGATACTTCTTTAGCACCAAAGTGGCCAAATATCCCAACGGAAATCGCTCCAACAGAGCCACAAATTCGGGTTATTGGAAGGCAACTGGCTTGGACAAACAAATTGTTACTTCAGAGGCAAGCCTCCTAATGGATTCAGAACTGATTGGATCATGCACGAGTATCGGCTCATCCTTAACGGCTCTCAGTCTAAGGTGA 324 0.463 MELVLQYLKRKVFSYPLPASIIPELHVCKSDPWDLPGDLEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSEASLLMDSELIGSCTSIGSSLTALSLR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01700 107 Gene3D NAC domain 1 96 IPR036093 GO:0003677|GO:0006355
Gma04g01700 107 ProSiteProfiles NAC domain profile. 1 107 IPR003441 GO:0003677|GO:0006355
Gma04g01700 107 SUPERFAMILY NAC domain 2 81 IPR036093 GO:0003677|GO:0006355
Gma04g01700 107 Pfam No apical meristem (NAM) protein 2 79 IPR003441 GO:0003677|GO:0006355
Gma04g01700 107 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 83 - -
Gma04g01700 107 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01700 Gma-Chr4 46189580 46189980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01700 2 86 NAC Transcription Factor Family AT5G13180 75.294 4.83e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma04g01700 NAM 4.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01700 - - gmx:100813600 218.009