Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01696 ATGGGAAACTGCAACGCCTGTGCGAAAGCTGATGTCGTAGAAGACAGCACCAACAACAGGAACAAGAAGTCTAATGAAACGAACCGCGGTGGTAGGAAGAAAGAGCAGAACCAGAAAAAACCGAACCCGTTCTCAGACGAACCGGCCCGGTCGGCGGCTCCGATCCGGGTCTTGAAGGACGTGATTCCAATGAGCCACCGGACGCGCATAAGCGACAAGTACATACTGGGCCGGGAACTGGGCCGGGGCGAGTTCGGCATCACCTACCTCTGCACGGACCGCGAGACCAAGGAGGCCCTGGCCTGCAAGTCGATTTCCAAGCGGAAGCTCCGAACCGCCGTGGACATCGAAGACGTGCGCCGCGAGGTCGCCATCATGTCCACGCTGCCGGAGCACCCCAACATAGTGAAGCTGAAGGCAACCTACGAGGACAACGAGAACGTCCACCTCGTCATGGAGCTCTGCGAGGGAGGCGAGCTCTTCGACCGGATTGTCGCCCGCGGTCACTACAGCGAGCGCGCCGCCGCTTCCGTGGCACGCACCATCGCCGAGGTTGTCAGGATGTGCCACAGCAAtggggtcatgcacagggacctcaagcccgagaatttcctcttcgctaacaagaaagagaattccgctctcaaggccatcgatttcggcctctccgtcttcttcaagccagGGGAGAGGTTTGTGGAGATTGTTGGGAGTCCTTACTATATGGCGCCAGAGGTTTTGAAGCGGAATTACGGGCCGGAGGTTGATGTGTGGAGTGCTGGGGTGATTCTTTATATTTTGTTGTGTGGTGTTCCTCCGTTTTGGGCAGAGACCGAGCAAGGTGTGGCTTTGGCGATCTTAAGAGGTGTGATTGACTTCAAGAGGGAACCTTGGCCACAGATATCGGAGAGTGCCAAGAGCCTTGTGCGGCGAATGTTGGAGCCGGATCCTAAAAAGCGCTTGACAGCGGAACAGGTGCTTGAACATCCCTGGCTGCAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTGAGGTCAAGGCTTAAGCAGTTTTCTGTGATGAATAGATTCAAAAAGAAAGCTCTGCGGGTAATTGCAGAACATTTATCTGTTGAAGAGGTAGAAATAATCAAAGACATGTTTACATTGATGGATACTGACAAAGATGGCAGAGTAACATTTGAGGAACTGAAGGCTGGGTTGAGGAAGGTTGGTTCACAATTGGCTGAGCCGGAGATTAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGAGTACTTGACTATGGAGAGTTTGTAGCTGTTACAATTCACTTGCAAAAAATGGAGAATGATGAGCATTTCCACAAAGCATTCAAGTTTTTTGACAAAGATGGGAGTGGGTATATTGAGTTAGGTGAGCTAGAGGAAGCATTAGCAGATGAGTCAGGAGAAACTGATGCTGATGTATTGAATGACATCATGCGGGAAGTTGACACTGACAAGGATGGTTGCATCAGTTATGAGGAGTTTGTGGCAATGATGAAAACTGGAACTGACTGGAGAAAAGCATCCAGGCAATATTCAAGGGAGAGATTCAAGAGTTTGAGCCTAAATTTGATGAAAGATGGCTCGCTTCAGCTTCATGATGAAATTACTGGTCAAGCTGTGGTGGTTTGA 1671 0.4686 MGNCNACAKADVVEDSTNNRNKKSNETNRGGRKKEQNQKKPNPFSDEPARSAAPIRVLKDVIPMSHRTRISDKYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAASVARTIAEVVRMCHSNGVMHRDLKPENFLFANKKENSALKAIDFGLSVFFKPGERFVEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISESAKSLVRRMLEPDPKKRLTAEQVLEHPWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKKALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVTFEELKAGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFKFFDKDGSGYIELGELEEALADESGETDADVLNDIMREVDTDKDGCISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDEITGQAVVV 556
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01696 556 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Gma04g01696 556 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Gma04g01696 556 MobiDBLite consensus disorder prediction 1 52 - -
Gma04g01696 556 Gene3D Transferase(Phosphotransferase) domain 1 160 340 - -
Gma04g01696 556 PANTHER BNAA09G44420D PROTEIN 21 532 - -
Gma04g01696 556 CDD STKc_CAMK 73 331 - -
Gma04g01696 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 532 - -
Gma04g01696 556 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01696 556 SMART efh_1 487 515 IPR002048 GO:0005509
Gma04g01696 556 SMART efh_1 451 479 IPR002048 GO:0005509
Gma04g01696 556 SMART efh_1 379 407 IPR002048 GO:0005509
Gma04g01696 556 SMART efh_1 415 443 IPR002048 GO:0005509
Gma04g01696 556 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Gma04g01696 556 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Gma04g01696 556 MobiDBLite consensus disorder prediction 15 41 - -
Gma04g01696 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Gma04g01696 556 SUPERFAMILY Protein kinase-like (PK-like) 56 357 IPR011009 -
Gma04g01696 556 Pfam EF-hand domain pair 380 439 IPR002048 GO:0005509
Gma04g01696 556 Pfam EF-hand domain pair 450 513 IPR002048 GO:0005509
Gma04g01696 556 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Gma04g01696 556 SUPERFAMILY EF-hand 360 539 IPR011992 -
Gma04g01696 556 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Gma04g01696 556 Gene3D Phosphorylase Kinase; domain 1 75 159 - -
Gma04g01696 556 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Gma04g01696 556 Gene3D - 341 516 - -
Gma04g01696 556 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Gma04g01696 556 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Gma04g01696 556 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01696 556 Pfam Protein kinase domain 76 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01696 556 CDD EFh 451 513 IPR002048 GO:0005509
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma04g01696 Gma-Chr4 46092675 46098034 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01696 1 556 EF-hand Containing Proteins AT1G18890 82.374 0.0 933
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma04g01696 Pkinase 4e-76 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01696 K13412 - gmx:100809838 1081.63
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01696 04 46092675 46098034 Gma04g01696 04 46092675 46098034 ECH