Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01674 ATGGAAAATGGAAACACAGCCAACGAACCCGCAAGCTTCTGGACTCAAGCAAACGCTCTTCTTAGGAAGAATTTAACCTTTCAGAAACGAAATGTTAAAACAAACGTTGGACTCATCCTGTCCCCGTTCATTTTGTGTCTCTTGCTGGTTCTGCTCCAAAGGTTGCTGGAGTACCAATTGGACAAGGCTGAGAACAAGTGTGGCTGCGTTTGTGTTAGGAGACAAGGGGACACGTGTCTCGAGGAGGAGTGCGGCATTGAGCATTCGGATTTGGACCAGTTTGCCACGTGTCCTATTCCCAGCCCTCCAGAGTGGCCTCCTCTGCTGCAAGTTCCCGCACCACAGTACCGCGCTGTGAGAACGGATTATTTCCCCTTTTCTGATTTTCCAAACACGTCCTGCAGGAAGAATGGCTCTTGCCCTGTCACTATGCTCTTCACTGGCACTAACCAATCTTTTGGAGAAATCATATCTAGGAATATGATTCCAAGTACCTTGAGTACTATATACAGCTCTGATATTATGGCTAGTTTGGCATCAAATGTAGTGGGATCAGAATCAGAGCCAGGGAACACCAATTTTCTGGAACCTGCTTTCTTTTCGGACCTTCCTATTTATTATCTACAGAATCAGTGCACGCAGAACTCTACATTCTCCGTTTCTGTTCAGATGTCAGGGATTAGCAAGCAGCAAGAGGTAATATGTGCTCAGGGTTTACGTTTATGGCGTAATAGTTCTTCTGAGGTGAACAATGAGCTATATAAAGGTTATTGGAGAAGTAACATAGAGAGACAGATCAATGAGATAGCTGCAGGTTATGATTTTTTAAATTCAAATGGGAGTATATTTAACGTCAGCATATGGTACAACTCAACCTACAAAAAGGACACTGGCTTTAATCCAATTGCATTGGCGCGTATTCCTCGTTCTGTAAATTTGGTATCAAATGCGTACCTTCAGTTTCTGTTGGGACCTGGTACCAAAATGTTTTTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCCCAATTAAATTGGATTTGGCTTCTCTTTTGGGTGGTGTCTTCTTTACATGGGTCATCTTGCAACTTTTCCCTATTCCCTTGACATCGCTAGTATATGAGAAGCAACAAAAGTTAAGAATCATGATGAAAATGCATGGTCTTGATGACGGGCCATATTGGATGATTTCGTATGGTTATTTTCTTGCCATATCCATTGTCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGGGTTGAATTTCTTCACAATGAATGACTACAGCATCCAATCCGTGTTTTATTTCATCTATATAAATTTACAAATTTCACTGGCTTTTTTATTGGCTTCCCTGTTTTCAAATGTTAAAACTGCTACAGTACTTGCATATATAGGTATGTTTGGAACTGGGCTATTAGCTGACTTTCCTTTCCATTTTTTTGTTCAAGACACATCATTTCCAAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGTTTTGCTTTATATCGTGGGCTATATGAGTTTTCGCAATATGCCTTTAGTGGGGATGCTTTGGGGACCGATGGTATGCGCTGGAGTGATCTGAGTGATAGCACAAATGGCATGAAGGAGGTCTTAATTATCATGTTTGTGGAGTGGCTATTGGTGCTTTTGTTTGCTTATTATATCGATCAAGTTTTGTCTTCAGGATGCAGGAAAAGTCCTCTTTTCTTGAAAAGATTTCAGAAAAAGCCCCATTCATCTTTTCGGAAGCCTAGTATCCAAAGGCAGAAATCTAAGGTTTTTGTTCAGATAGAGAAACCTGATGTCACTCAAGAGAGGGAGAAGGTGGAGGAACTGCTACTTGAATCGACTATTAATCAAGCAATTGTATGCGACAACATGAGAAAGGTCTATCCGGGGAGGGATGGCAACCCGGAGAAACTTGCAGTGAGAGGGTTGTCCCTTGCTTTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACCAAGCCAACCTCTGGTACCGCATATGTTCAAGGTCTTGACTTAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGACATTTATTTACCTCACAAGACAAGATTTGAGCAAAATTTAACTTCCAATCTAATGCTGCAGGCAGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTCACGGAGGAGTTGCTGATAAGCAAGCTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTTAGTGTGGCAATTTCGTTGATTGGAGATCCTAAAGTAGTGGTTTATATGGACGAGCCAAGTACTGGACTTGACCCTGCATCAAGAAAAAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAAGCAGAAGTCCTATGTGATCGATTAGGAATATTTGTAGACGGTGGCTTGCAGTGCATAGGAAATCCGAAGGAGTTGAAAGCCAGGTATGGAGGAACATATGTCTTCACAATGACAACATCTATTGATCATGAAAATGATGTAGAGAATTTGGTGCGACAGCTCTTCCCAAATGCTAACAAGATCTACCATATCTCTGGCACCCAAAAATTCGAGCTACCAAAGGATGAGGTTAAAATAGCAAATGTATTCCAAGCTGTAGAAACCGCAAAGAGAAGCTTCACCGTTTCAGCGTGGGGTTTAGCTGATACCACATTGGAAGATGTCTTCATTAAAGTTGCACGTGGGGCTCAGGCATTTAACACCTTGTCATAA 2829 0.4175 MENGNTANEPASFWTQANALLRKNLTFQKRNVKTNVGLILSPFILCLLLVLLQRLLEYQLDKAENKCGCVCVRRQGDTCLEEECGIEHSDLDQFATCPIPSPPEWPPLLQVPAPQYRAVRTDYFPFSDFPNTSCRKNGSCPVTMLFTGTNQSFGEIISRNMIPSTLSTIYSSDIMASLASNVVGSESEPGNTNFLEPAFFSDLPIYYLQNQCTQNSTFSVSVQMSGISKQQEVICAQGLRLWRNSSSEVNNELYKGYWRSNIERQINEIAAGYDFLNSNGSIFNVSIWYNSTYKKDTGFNPIALARIPRSVNLVSNAYLQFLLGPGTKMFFEFVKEMPKPETPIKLDLASLLGGVFFTWVILQLFPIPLTSLVYEKQQKLRIMMKMHGLDDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDYSIQSVFYFIYINLQISLAFLLASLFSNVKTATVLAYIGMFGTGLLADFPFHFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYAFSGDALGTDGMRWSDLSDSTNGMKEVLIIMFVEWLLVLLFAYYIDQVLSSGCRKSPLFLKRFQKKPHSSFRKPSIQRQKSKVFVQIEKPDVTQEREKVEELLLESTINQAIVCDNMRKVYPGRDGNPEKLAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAYVQGLDLRTHMDGIYTSMGVCPQHDIYLPHKTRFEQNLTSNLMLQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVVYMDEPSTGLDPASRKNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGGLQCIGNPKELKARYGGTYVFTMTTSIDHENDVENLVRQLFPNANKIYHISGTQKFELPKDEVKIANVFQAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFNTLS 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01674 942 Pfam ABC-2 family transporter protein 347 559 - -
Gma04g01674 942 ProSitePatterns ABC transporters family signature. 758 772 IPR017871 GO:0005524
Gma04g01674 942 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 857 IPR003439 GO:0005524
Gma04g01674 942 Pfam ABC transporter 649 786 IPR003439 GO:0005524
Gma04g01674 942 SMART AAA_5 657 834 IPR003593 -
Gma04g01674 942 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 9 942 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gma04g01674 942 CDD ABC_subfamily_A 631 845 - -
Gma04g01674 942 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 9 942 - -
Gma04g01674 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 619 860 IPR027417 -
Gma04g01674 942 Gene3D - 617 879 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01674 Gma-Chr4 45540933 45548789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01674 603 844 Calmodulin-binding Proteins AT2G36910 22.308 1.12e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01674 - - gmx:100805474 1686.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01674 04 45540933 45548789 Gma04g01674 04 45540933 45548789 ECH