Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01661 ATGCCTGGCCAGAGAAACTCCAGAACTTCAAAATTCACAGAAAGTGAGATTAATGATCTGATGTTGAGGCTACAAGCACTGCTACCACAACTAAACCAAACAAGCAACTCAAGGGCATCATCAGTAAGCGTGATGAAGATCATGAAGGAAACTTGCTCTCACATCACAAGGCTACAGAAAGAGGTGAAAGACCTTGGTGAAAGGCTAGTACAGCTGATGGATTCTGTAGACCTTAGTGATATTGACGAGGAACGTTTTACAAGACTTCTGCAACAATAA 279 0.4194 MPGQRNSRTSKFTESEINDLMLRLQALLPQLNQTSNSRASSVSVMKIMKETCSHITRLQKEVKDLGERLVQLMDSVDLSDIDEERFTRLLQQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01661 92 Coils Coil 55 75 - -
Gma04g01661 92 Gene3D - 4 85 IPR036638 GO:0046983
Gma04g01661 92 PANTHER DNA BINDING PROTEIN 1 92 IPR044172 -
Gma04g01661 92 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 74 IPR036638 GO:0046983
Gma04g01661 92 PANTHER DNA BINDING PROTEIN 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01661 Gma-Chr4 45128864 45129794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01661 5 77 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 47.945 7.44e-17 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01661 - - gmx:100790746 171.785