Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01660 ATGGATTCTTTGAAGATGTTCAAAGGTTATGGCAAAGTAGAACACGAGCAACACCACCTTGAAGATCATTGTAACCCCAAACCCAAACCTAAATTCTCAAAACCCTTCATCGCCACAATTTCCATCTTCGCAATACTCTTCCTCACTCTCACCTTCGCCTTTGCCCTAGCATCCATCCTCCACCACACCAAGTCACAACAACAACTTCTGATCAACTTGGTCGAGTCGATCCGATTCGTTTGCAATGTCACGCGCTTCCCCAGTGCGTGCCTCCCTGCCATCCCACCCTCTGCCAACATCGCTAACCACGACGTGCTAGGTCGACTTAGCGACTCGCTGTTGGCCTGGGCGGCACTCACGGAGGTGACAATCTCCGACGTCCAGACCTGGGCGAGCATGGCGATGACGGACCAGGAGACGTGCCTTGACGGGCTGGAAGAGGTGGGTGATGTGGCAACGATGGAAGAGATGAAGAAAATAATGAAGAGGGCGAATGAGTACACTAGTAACAGTTTGGCTATTGTCGCTAATATTCACAACTTGTTACAACGATTCTACATGGCACTCCACTGA 573 0.5044 MDSLKMFKGYGKVEHEQHHLEDHCNPKPKPKFSKPFIATISIFAILFLTLTFAFALASILHHTKSQQQLLINLVESIRFVCNVTRFPSACLPAIPPSANIANHDVLGRLSDSLLAWAALTEVTISDVQTWASMAMTDQETCLDGLEEVGDVATMEEMKKIMKRANEYTSNSLAIVANIHNLLQRFYMALH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01660 190 Pfam Plant invertase/pectin methylesterase inhibitor 105 174 IPR006501 GO:0004857
Gma04g01660 190 PANTHER PECTINESTERASE 3 106 - -
Gma04g01660 190 PANTHER PECTINESTERASE 117 185 - -
Gma04g01660 190 SMART PMEI_2 72 174 IPR006501 GO:0004857
Gma04g01660 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 179 IPR035513 -
Gma04g01660 190 CDD PMEI-like_3 123 180 - -
Gma04g01660 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 103 178 IPR035513 -
Gma04g01660 190 PANTHER PECTINESTERASE 1-LIKE 3 106 - -
Gma04g01660 190 PANTHER PECTINESTERASE 1-LIKE 117 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01660 Gma-Chr4 45118425 45119110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01660 1 190 Carbohydrate Esterase AT1G53840 26.172 1.30e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01660 - - gmx:100789567 251.136