Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01655 ATGAAGGGAGGTAGTGATGACTTCCACCACCACCATCACCACCATCACCATAACCACCACCGACAAAACTTCCCATTCCAACTCCTTGAGAAGAAAGAAGACCAACAAGACCCTTCTTCTTGCTCCACCTCTTCCCCATACCCTCCCCTAGCCATCTTAGCTGAACCCTCCACCTCCAACAACAACAACCAACTCCTCCCCACACCCTCCTCCGAACCCTCCCCCAAAAAACCACCCCCCAAAAGAACCTCCACCAAAGACCGGCACACGAAGGTCGACGGTCGCGGTCGTCGAATTCGAATGCCGGCTCTCTGCGCCGCTAGGGTGTTCCAGCTCACGCGTGAGCTGGGACACAAGTCTGACGGCGAGACCATCGAGTGGCTCCTCCAACAGGCGGAGCCATCCGTCATTGCTGCCACCGGCACCGGCACTATCCCCGCTAACTTCACCTCCCTCAACATCTCCCTCCGCAGCTCCGGCTCATCCATGTCCGTCCCCTCCCAACTACGATCCAGCTACTTCCACAACTCAAACTTCTCCCTCCAACCTAGAAGAAGCCTATTCCTAGAAAACACCAACACTCCTCCCACAACAACAACACTCCTCCATTTCCAATCCAACAACAACAACGCCATCTTCCAACCCAAGCACGAATTGCGCGAATCTTCATCACTAGACTTGTCCTCAGAGAACAACAACGAAGAGGGTAATTTTGGAAGAAAAAGAAGACCCTTGGAGCAAGACCTATCCTCAACTATACAACACCAAGTTGGAAACTATTTGATGCAATCAAACACATCGGGGACAATTCCGGCGAGCCACCACGCTCAAATTCCGGCGAACATATGGATGCTAGCGAATTCAAATAATCACCACCTAGGTGGTGGTGTGAGTGGTGAAGCTCCTCCTTTGTGGACATTCCCTGGTGTGAGTAACAGTGCTGCCTTGTATAGAGGAACCATGTCAAGTGGGCTGCATTTCATGAACTTTCCAACCCCAATGGCCCTTTTGCCGGGTCAGCAATTAGGGTCTTCTGGGATTGGTGGGAATATGAACAACAACGAAGGACATTTGAGTATGCTTTCGGGGCTTAACCCTAATTATCGAACGACGGTGATCGGAATTTCGGAGTCTCAGGCGAGTGAGTCACAGTCGACACATCATGGTGGAAGCGAGGATCGGCATGAGCATGAATGA 1197 0.518 MKGGSDDFHHHHHHHHHNHHRQNFPFQLLEKKEDQQDPSSCSTSSPYPPLAILAEPSTSNNNNQLLPTPSSEPSPKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFHNSNFSLQPRRSLFLENTNTPPTTTTLLHFQSNNNNAIFQPKHELRESSSLDLSSENNNEEGNFGRKRRPLEQDLSSTIQHQVGNYLMQSNTSGTIPASHHAQIPANIWMLANSNNHHLGGGVSGEAPPLWTFPGVSNSAALYRGTMSSGLHFMNFPTPMALLPGQQLGSSGIGGNMNNNEGHLSMLSGLNPNYRTTVIGISESQASESQSTHHGGSEDRHEHE 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01655 398 MobiDBLite consensus disorder prediction 54 70 - -
Gma04g01655 398 MobiDBLite consensus disorder prediction 79 97 - -
Gma04g01655 398 MobiDBLite consensus disorder prediction 23 37 - -
Gma04g01655 398 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 14 396 - -
Gma04g01655 398 MobiDBLite consensus disorder prediction 7 22 - -
Gma04g01655 398 MobiDBLite consensus disorder prediction 220 246 - -
Gma04g01655 398 MobiDBLite consensus disorder prediction 377 398 - -
Gma04g01655 398 MobiDBLite consensus disorder prediction 1 97 - -
Gma04g01655 398 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Gma04g01655 398 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 396 IPR005333 GO:0003700
Gma04g01655 398 Pfam TCP family transcription factor 83 243 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01655 Gma-Chr4 44983765 44985519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01655 70 356 TCP Transcription Factor Family AT3G47620 45.559 5.18e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma04g01655 TCP 3.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01655 - - gmx:100809154 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01731 06 17540020 17541682 Gma04g01655 04 44983765 44985519 ECH
Gma04g01655 04 44983765 44985519 Gma04g01655 04 44983765 44985519 ECH