Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01648 ATGTGGGAAAAATGGACACCAAAAGAAGTGTTGGCTGCTAAAGGTGTGAAGCCAACATTGTTTCCCAACCTTAATACTCTTGCACTTGTTGAGGGAAAGCGGGGAGGAAGGGTTCTCTATCCTAGGTGTAATGTCAGGTACGAGCTCTACCCTTTCTACCATGTCACTGCTTCCCCTCCTTCACCTTCACCTTCACCACCAACACTTCTTCCTCCTTCAACTTCACCAATTTCCCCAGGAAGCAGTGGGATCTCAGCTGGAACAATTGTTCCAATTGTGGTTCCAATTACGATTGTTGTGCTTATATTTATAGTTAGAATTTGTTTCTTGAGTAGAAGAGCAAGGAAGAAGCAGCAGGATTCTGTAAAGGAAGGACAAAGCACTCTTCTGAGTGGACAAGTAGTAGCTATCAAGAGACTCTCCAAAAGCTCTGGACAAGGTGGAGAAGAATTTAAGAATGAAGTGCTGGTGGTTGCCAAGCTTCAACATAGAAATTTAGTCAGGCTTCTTGGGTTTTGCTTGCAAAGAGAAGAAAAACTACTTGTTTATGAATATGTGCCCAACAAAAGTCTTGACTATATTCTCTTTGATCCTGAAAAGCAAAGGGAGTTGGATTGGGGGAGACGTTACAAGATTATTGGAGGGATTGCTCGAGGTATTCAATACCTTCATGAAGATTCTAGGCTTAGAATTATACATCTTTATCTTAAAGCTAGTAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAAATTTGGCATGGCAAGAATATTTGGAGTCGACAAACTCAACAAAACACCAGCAGAATAGTAGGGACTTAGGCACAATTAATGGGCTTCAAAGTCGGGACTATATATGA 864 0.4097 MWEKWTPKEVLAAKGVKPTLFPNLNTLALVEGKRGGRVLYPRCNVRYELYPFYHVTASPPSPSPSPPTLLPPSTSPISPGSSGISAGTIVPIVVPITIVVLIFIVRICFLSRRARKKQQDSVKEGQSTLLSGQVVAIKRLSKSSGQGGEEFKNEVLVVAKLQHRNLVRLLGFCLQREEKLLVYEYVPNKSLDYILFDPEKQRELDWGRRYKIIGGIARGIQYLHEDSRLRIIHLYLKASNILLDGDMNPKISNLAWQEYLESTNSTKHQQNSRDLGTINGLQSRDYI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01648 287 Pfam Protein tyrosine and serine/threonine kinase 132 271 IPR001245 GO:0004672|GO:0006468
Gma04g01648 287 ProSiteProfiles Protein kinase domain profile. 108 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01648 287 Gene3D Transferase(Phosphotransferase) domain 1 186 282 - -
Gma04g01648 287 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 116 - -
Gma04g01648 287 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 128 256 - -
Gma04g01648 287 Gene3D Phosphorylase Kinase; domain 1 110 185 - -
Gma04g01648 287 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 35 116 - -
Gma04g01648 287 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 128 256 - -
Gma04g01648 287 SUPERFAMILY Protein kinase-like (PK-like) 125 276 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01648 Gma-Chr4 44727310 44732814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01648 30 255 Receptor kinase-like Gene Family AT4G23220 48.485 1.68e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma04g01648 PK_Tyr_Ser-Thr 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01648 - - gmx:100305391 331.643