Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01638 ATGGAGAATCAGCAACTCACGTTTTGGAAGTCCAATTATGAAATTGATGACTATCCATTTGCACCTACGTGCCAATTTTCTTCATATGATTATTGCAGCTGGGGTAATGCCAATGATGGGTATCATTGGCCATATGAATTTCCTTTGCAAGATAGCTATCTTGATGCTATCCCTTATATGAAGTGTTATTATCCTCATGACATTTTGTATGAAAGTACTCTTCCCATTGAACCAACCTCACTAAGCATAAGAGACTATGACTTTTCAGATGTTAAAAATGTGCTTTCTGCGTTGAACGAAACCGATGGTTCGGATCATAAACCTGCTTTTTCATCATGCAATGATGGAGAAAGTGTAGATGAAATGCAGGAAGATTTGAAGGGTAAGAAATGCAGAGAAGAGGGAATTAGTAGCAGTGCGAAAATGTTGTCAAGGAAAACCGTTTCTCAATACTTTTACATGCCAATATCTCAAGCCGCAAGAGAGCTCAATGTGGGCCTCACACACTTGAAGAAAAGGTGTAGGGAGTTAGGAATTCAGAGGTGGCCACATAGGAAGCTACTGAGTCTTCAAACCCTAATAAAGAATATACAAGAGCAAAGAGAGACCGGGGGCCATGAAAATGATGAAAAAACTAGGGCTGCCATTGAGATCTTGGAGAGAGAACAGAGGAAGGTGGAGGAAATGCCGGATTTGGAACTTGAGGATAATACAAGAAGGCTTAGACAAGCTTGTTTTAAGGCTAACTACAAGAAGAGGAAACTCATGGGGATGAGGCTCATTGAACCCGATTCTTCTCTTAGTGGTCTATTTAACAAGTATTGA 825 0.4024 MENQQLTFWKSNYEIDDYPFAPTCQFSSYDYCSWGNANDGYHWPYEFPLQDSYLDAIPYMKCYYPHDILYESTLPIEPTSLSIRDYDFSDVKNVLSALNETDGSDHKPAFSSCNDGESVDEMQEDLKGKKCREEGISSSAKMLSRKTVSQYFYMPISQAARELNVGLTHLKKRCRELGIQRWPHRKLLSLQTLIKNIQEQRETGGHENDEKTRAAIEILEREQRKVEEMPDLELEDNTRRLRQACFKANYKKRKLMGMRLIEPDSSLSGLFNKY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01638 274 ProSiteProfiles RWP-RK domain profile. 123 210 IPR003035 -
Gma04g01638 274 Pfam RWP-RK domain 143 190 IPR003035 -
Gma04g01638 274 PANTHER PROTEIN RKD1-RELATED 41 260 - -
Gma04g01638 274 PANTHER PROTEIN RKD4 41 260 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01638 Gma-Chr4 44610226 44611555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01638 129 258 AtRKD Transcription Factor Family AT1G18790 61.364 1.89e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma04g01638 RWP-RK 3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01638 - - gmx:100782238 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01638 04 44610226 44611555 Gma04g01638 04 44610226 44611555 ECH
Gma17g00945 17 8076028 8077183 Gma04g01638 04 44610226 44611555 PCT
Gma05g00258 05 2333014 2334273 Gma04g01638 04 44610226 44611555 PCT