Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma04g01624 | ATGCCAACTGCTGTTATGGTTGGCACTGGAGTAGGTGCATCTCAGGGAATACTTATCAAAGGAGGTCAAGCATTAGAAAATGCACATAAGGTGAACTGTGTTGTATTTGACAAAACAGGTACTCTCACAATTGGGAAGCCTGTGGTAGTAAATACAAAGTTGTTGACAAATATGGTACTCCGGGAATTCTATGAACTTGTGGTTGTAGCTGAGGTGAATAGTGAGCATCCACTGGCTAAGGCCATAGTTGAGTATGCCAAAAAACTGAGAGATGATGAGAACCCCATTTGGCTAGAGGCACAGGATTTTATGTCCATTGCTGGACATGGAGTTAAGGCCATGGTTAGAAACAAGGAAATACTTGTGGGTAACAAGAGCTTGATGGAAGACCACAATGTTGCACTTCCCATCGATGCTGAAGAGATGCTTGCAGAAGCCGAAGCAATGGCTCAAACTGGAATTATAGTGTCTATTAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACTAGCTACACAAGAAGTCATTTCCATTCTGAAGTCCATGAAAATTAGGAACATCATGGTGACTGGGGACAATTGGGGAACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAAACAGTTATTGTTGAGGCCAAACCAGATCAGAAACCAGATTAG | 675 | 0.4207 | MPTAVMVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTIGKPVVVNTKLLTNMVLREFYELVVVAEVNSEHPLAKAIVEYAKKLRDDENPIWLEAQDFMSIAGHGVKAMVRNKEILVGNKSLMEDHNVALPIDAEEMLAEAEAMAQTGIIVSINREVVGVLAVSDPLKLATQEVISILKSMKIRNIMVTGDNWGTANSIAREVGIETVIVEAKPDQKPD | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma04g01624 | 224 | Pfam | haloacid dehalogenase-like hydrolase | 31 | 222 | - | - | |
Gma04g01624 | 224 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 37 | 43 | IPR018303 | - | |
Gma04g01624 | 224 | PANTHER | ATP7, ISOFORM B | 2 | 223 | - | - | |
Gma04g01624 | 224 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 3 | 222 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Gma04g01624 | 224 | Gene3D | - | 42 | 118 | IPR023299 | GO:0000166 | |
Gma04g01624 | 224 | Gene3D | - | 119 | 170 | IPR023299 | GO:0000166 | |
Gma04g01624 | 224 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 2 | 223 | - | - | |
Gma04g01624 | 224 | SUPERFAMILY | HAD-like | 30 | 223 | IPR036412 | - | |
Gma04g01624 | 224 | PRINTS | P-type cation-transporting ATPase superfamily signature | 35 | 49 | - | - | |
Gma04g01624 | 224 | PRINTS | P-type cation-transporting ATPase superfamily signature | 164 | 175 | - | - | |
Gma04g01624 | 224 | PRINTS | P-type cation-transporting ATPase superfamily signature | 186 | 196 | - | - | |
Gma04g01624 | 224 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 37 | 168 | IPR023299 | GO:0000166 | |
Gma04g01624 | 224 | Gene3D | - | 2 | 224 | IPR023214 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma04g01624 | Gma-Chr4 | 44168478 | 44169430 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma04g01624 | 2 | 224 | Primary Pumps ATPases | AT1G63440 | 77.232 | 3.04e-117 | 355 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma04g01624 | K17686 | - | gmx:106798586 | 429.098 |