Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01624 ATGCCAACTGCTGTTATGGTTGGCACTGGAGTAGGTGCATCTCAGGGAATACTTATCAAAGGAGGTCAAGCATTAGAAAATGCACATAAGGTGAACTGTGTTGTATTTGACAAAACAGGTACTCTCACAATTGGGAAGCCTGTGGTAGTAAATACAAAGTTGTTGACAAATATGGTACTCCGGGAATTCTATGAACTTGTGGTTGTAGCTGAGGTGAATAGTGAGCATCCACTGGCTAAGGCCATAGTTGAGTATGCCAAAAAACTGAGAGATGATGAGAACCCCATTTGGCTAGAGGCACAGGATTTTATGTCCATTGCTGGACATGGAGTTAAGGCCATGGTTAGAAACAAGGAAATACTTGTGGGTAACAAGAGCTTGATGGAAGACCACAATGTTGCACTTCCCATCGATGCTGAAGAGATGCTTGCAGAAGCCGAAGCAATGGCTCAAACTGGAATTATAGTGTCTATTAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACTAGCTACACAAGAAGTCATTTCCATTCTGAAGTCCATGAAAATTAGGAACATCATGGTGACTGGGGACAATTGGGGAACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAAACAGTTATTGTTGAGGCCAAACCAGATCAGAAACCAGATTAG 675 0.4207 MPTAVMVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTIGKPVVVNTKLLTNMVLREFYELVVVAEVNSEHPLAKAIVEYAKKLRDDENPIWLEAQDFMSIAGHGVKAMVRNKEILVGNKSLMEDHNVALPIDAEEMLAEAEAMAQTGIIVSINREVVGVLAVSDPLKLATQEVISILKSMKIRNIMVTGDNWGTANSIAREVGIETVIVEAKPDQKPD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01624 224 Pfam haloacid dehalogenase-like hydrolase 31 222 - -
Gma04g01624 224 ProSitePatterns E1-E2 ATPases phosphorylation site. 37 43 IPR018303 -
Gma04g01624 224 PANTHER ATP7, ISOFORM B 2 223 - -
Gma04g01624 224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 3 222 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma04g01624 224 Gene3D - 42 118 IPR023299 GO:0000166
Gma04g01624 224 Gene3D - 119 170 IPR023299 GO:0000166
Gma04g01624 224 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 2 223 - -
Gma04g01624 224 SUPERFAMILY HAD-like 30 223 IPR036412 -
Gma04g01624 224 PRINTS P-type cation-transporting ATPase superfamily signature 35 49 - -
Gma04g01624 224 PRINTS P-type cation-transporting ATPase superfamily signature 164 175 - -
Gma04g01624 224 PRINTS P-type cation-transporting ATPase superfamily signature 186 196 - -
Gma04g01624 224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 37 168 IPR023299 GO:0000166
Gma04g01624 224 Gene3D - 2 224 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01624 Gma-Chr4 44168478 44169430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01624 2 224 Primary Pumps ATPases AT1G63440 77.232 3.04e-117 355