Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01616 ATGGAGTCTGGTGATGAGATTAATTTGAACATAGAAAGTGGGAATAATGGGAAGAGTGGTGGTGATGGGTTCGTTGATAGGAGTAAGGTGCGGATTTTGTTGTGCGATAACGATTCCAAGAGTTCTCAAGAGGTTTTCACGCTTCTTTTGAGATGTTCTTATCAGGTTACCTCGGTAAAGTCGGCAAGACAGGTAATTGATGCACTGAATGCGGAGGGGCAACATATAGATATCATACTGGCTGAGCTTGACCTTCCGATGAAGAAGGGCATGAAGATGTTGAAGTACATAGCACAGGATAAAGAGTTTCGCCGAATCCCTGTTATAATGATGTCCGCACAAGATGAGGTATCCGTTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGACGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAATTATGATTTTGATCTGGTAGTATCTGACCCGAGTGATGCCAACACAAACAGCACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAGAGAAGCACTAATCCTGAGTCTACTATTGCAATTGCTGCTGCTGTTGAGGAACCTCCAGATGCTCATGCATCAGAATGCGGGCCTGATGTGGATGGAGTTAATGATCACCAAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGGGAGTCATCAGCCTTCTTCACGTATGTTAAAGCATCAATACTTAAGAGCAACTTGGAAGGGGTTGTTAATGTAGACAAAAATGGTGCTACACATGTGAGGATGGAAGTTATGCATCAAACATGTGCTCAACAAGGGGTGAATGACCTTCAAATACGGGAAAATGGAGAGGCATATGAAAGTCAATCGCAAGATGACTTACCCAGCAGCACTAGTATACCTGATTCTTTGTCTATTGAGAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACAGCAAAAGCACTACAGGGAAGAAAATTTACATCAGGGTGTGATGCATCCAAGAAATGGGACTCATTGTTCCGAGCTTGAAGTATCTGGCATGGCTTCCCAACAGGTTTATCCATATTATATTTCAGGGGTTGTTAATCATGTTATGATGCCTTCATCAGCACAAATGTATCATCAAAAGAATATCCAGGACCTACAGAATCATCCTAGCTCAGCTATGATTTCACAGTACAGCCATCTTCCCCAAGGTGGTCCTCATGGAACGGGGATGACATCCTTCCCATATTACCCAATGAGCATATGCTTACAACCTGGTCAGATTCCTAATCCTCATTCATGGCAATCATTTGGAAACTCAAGTTCATCTGAAGCAAAATTAAGTAAAGTTGATAGGAGAGAAGCAGCATTGATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACCGGAAACGACTTGCGGAAAGGCGGCCTCGTGTGAGGGGTCAGTTTGTCAGAAAGTTGAAGGGTGCTAATGCGGATCTTAATGGGCAGCCTGCATCGATTGACTATGACGAAGATGACGAAGAGGATGAAGATGACCAGGGAGCAAGAGATTCTTCTCCCGAGGATGCTTGA 1653 0.4338 MESGDEINLNIESGNNGKSGGDGFVDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSTNPESTIAIAAAVEEPPDAHASECGPDVDGVNDHQTAHFSSGPKKSELRIGESSAFFTYVKASILKSNLEGVVNVDKNGATHVRMEVMHQTCAQQGVNDLQIRENGEAYESQSQDDLPSSTSIPDSLSIERSCTPPASMEVSQQKHYREENLHQGVMHPRNGTHCSELEVSGMASQQVYPYYISGVVNHVMMPSSAQMYHQKNIQDLQNHPSSAMISQYSHLPQGGPHGTGMTSFPYYPMSICLQPGQIPNPHSWQSFGNSSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLKGANADLNGQPASIDYDEDDEEDEDDQGARDSSPEDA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01616 550 MobiDBLite consensus disorder prediction 303 322 - -
Gma04g01616 550 SUPERFAMILY CheY-like 26 156 IPR011006 -
Gma04g01616 550 MobiDBLite consensus disorder prediction 526 550 - -
Gma04g01616 550 Pfam Response regulator receiver domain 32 143 IPR001789 GO:0000160
Gma04g01616 550 Pfam CCT motif 470 512 IPR010402 GO:0005515
Gma04g01616 550 MobiDBLite consensus disorder prediction 512 550 - -
Gma04g01616 550 ProSiteProfiles Response regulatory domain profile. 31 149 IPR001789 GO:0000160
Gma04g01616 550 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 8 533 - -
Gma04g01616 550 SMART REC_2 30 145 IPR001789 GO:0000160
Gma04g01616 550 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 533 IPR045279 GO:0009736
Gma04g01616 550 Gene3D - 30 237 - -
Gma04g01616 550 ProSiteProfiles CCT domain profile. 470 512 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01616 Gma-Chr4 43996433 44002099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01616 20 549 Response Regulator Gene Family AT5G61380 50.159 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gma04g01616 Response_reg 1.8e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01616 K12127 - gmx:100799728 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01616 04 43996433 44002099 Gma04g01616 04 43996433 44002099 ECH