Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01586 ATGGACGCTGACGTGGACCAATCTGAGACCGTTGGATCAAGGGGTGGCGTAGGATCCTCATCAAGTTTTAGAGACAGAAAGAATTGGAGAAACAAACGCTCACTCACTCACTCACTCCTTTGTTTGTTCTTTTCTCCCTTGGCTTCCTCATCCATCATCGCTATCATTAGCAAATTAACAAAGACATGGGGTTTCTCTTCTTCTTCTTCTCCTTATTTTTCTTCTCTCCAACCACTTTCAAGATGTGATGCTGATCTGGGGTGTTGCTGTTTTTCCCTTGTGATCGATTTCTCTTGTGTTGGTGGTGATCAAGAAAGTGTGGTTAATTTTGCTTTCTTTGCTGATCCCAAGAGCTTCCCTTGTGGAAGATCCTTGGGTGGCCACATGAGGTCACATGTCACCGCCAATGTTTCAACCGAGGCAGAGAAGCTTTCATCTTTCAACAACAATGGTGGAGGAGGAGATTCTGATCAAGGAGGAACTAACAATGGAGGAGGGTATGGTCTGAGGGAGAATCCAAAGAAGACTTGGAGGTTCAATGATTCGAGTGAGGACAACAACAACAACAACACTACTTTGTTGGTGTTGGACAAGTTGTGCAAAGAGTGTGGCAAAGGGTTTCACTCTTGGAAAGCTCTGTTTGGTCACATGAAGTGCCACTCTGAGAAATTGTCCCAAAACAACAACAGCAGCAGCAGCTTATTATTGGAGGATCAAGATTCGTGGAATGATAATAACACCAATGCTAGCCAGAGCCAGAAGATGACGGTGTTGATGGATGATAGCCACTCTGAGAATGAGGCCACGGCTCCGAATCGAAGGAGAAGATCCAAGAGGAGAAGGACAAGGTACATGGCCCCTTCAACTTCTTCTGTGTCCCTTGTTTCTGAGGCTCATGAGCAGGAGCAGGAAGAGGTTGCAATGAGTTTGATGATGCTTAGTAGGGATGTGAGTCCTTGGTGCGGTCTCAATTCTGTTAATTCAATGCAGTTTGAATCTCCTTCTTTGGTTCCAACCAATTTGGATTCTAAGGCTGAGGGCAAGAGGGTTGTTATCTCTAATGGTTCTGAGAAAAAGGTCACCAAACCAAGGGATGTGAAGTGGGAGTTTTGCAATTTGGATGTTTCAAATCTCAACTCAAAAGGGAAAATGAGTTCAGAGCTTTTGGGTACTCAGAGTCCTGGAAGTGAATTTGGGGTCAACAAGACCATGGTTTCTAATTCTGCATTTGAGGACAATGAAACAGATGATAATCATAATAGTAACAATAAGTGCACTTCAATCAAGGCAAATTTTATGGACTCTGAGTTGAAGTCAAGTTCTTTGAAGAGTTGGGTGAACAACAAGCCCTCAGAAGATGAATTTAGCAAAAGCTCCAATAAGAGAGGAAAGTTTGAGTGTACTACTTGCAAGAAAATCTTCCACTCATACCAAGCACTTGGAGGCCATAGAGCTAGTCACAAGAGGATCAAGGGTTGCTTTGCTTCAAGAAATGAGAGCAGTGAGAACAGCACTGAGTTGGAAGCAGAACTCTCCCCTGACCATACAACAGAAAATAAGCTTCTGAAGAATGAGTATGTGGAAGAACATGAAATGGTTACTACTGTTACTACTACTACTACGACTACTGCTATTACTGATTTTGACAATGAGATAAACACAGTGAGAGATTCCAAGAAGGGGAAAGTGCATGAGTGTTCAATTTGCCTCAAGATTTTTCCATCTGGTCAAGCATTGGGTGGCCACAAGAGATCTCATCACTTGGCTGGTGGGTCTGAGAGTGCTAGAAATTTTCAAAGTCAAACAATTGTACTTCAGGAAGCAGCACCTGAAATTAGGGACTTTTTTGACCTTAACCTTCCTGCTTCTACAGAGGAAGAAGGCACTGGCCATCGCCATGCTGAGCATTACAAACCTTGGTGGGTAGTAGGAGGAAATCACAAGCAGGAGGCACTGGTTGGCCTCATTTCTAACTAA 1977 0.435 MDADVDQSETVGSRGGVGSSSSFRDRKNWRNKRSLTHSLLCLFFSPLASSSIIAIISKLTKTWGFSSSSSPYFSSLQPLSRCDADLGCCCFSLVIDFSCVGGDQESVVNFAFFADPKSFPCGRSLGGHMRSHVTANVSTEAEKLSSFNNNGGGGDSDQGGTNNGGGYGLRENPKKTWRFNDSSEDNNNNNTTLLVLDKLCKECGKGFHSWKALFGHMKCHSEKLSQNNNSSSSLLLEDQDSWNDNNTNASQSQKMTVLMDDSHSENEATAPNRRRRSKRRRTRYMAPSTSSVSLVSEAHEQEQEEVAMSLMMLSRDVSPWCGLNSVNSMQFESPSLVPTNLDSKAEGKRVVISNGSEKKVTKPRDVKWEFCNLDVSNLNSKGKMSSELLGTQSPGSEFGVNKTMVSNSAFEDNETDDNHNSNNKCTSIKANFMDSELKSSSLKSWVNNKPSEDEFSKSSNKRGKFECTTCKKIFHSYQALGGHRASHKRIKGCFASRNESSENSTELEAELSPDHTTENKLLKNEYVEEHEMVTTVTTTTTTTAITDFDNEINTVRDSKKGKVHECSICLKIFPSGQALGGHKRSHHLAGGSESARNFQSQTIVLQEAAPEIRDFFDLNLPASTEEEGTGHRHAEHYKPWWVVGGNHKQEALVGLISN 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01586 658 MobiDBLite consensus disorder prediction 497 517 - -
Gma04g01586 658 MobiDBLite consensus disorder prediction 1 25 - -
Gma04g01586 658 ProSitePatterns Zinc finger C2H2 type domain signature. 467 487 IPR013087 -
Gma04g01586 658 MobiDBLite consensus disorder prediction 144 165 - -
Gma04g01586 658 ProSiteProfiles Zinc finger C2H2 type domain profile. 465 492 IPR013087 -
Gma04g01586 658 Pfam C2H2-type zinc finger 563 587 - -
Gma04g01586 658 Pfam C2H2-type zinc finger 200 222 - -
Gma04g01586 658 Pfam C2H2-type zinc finger 465 489 - -
Gma04g01586 658 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 117 658 - -
Gma04g01586 658 ProSitePatterns Zinc finger C2H2 type domain signature. 200 220 IPR013087 -
Gma04g01586 658 MobiDBLite consensus disorder prediction 224 297 - -
Gma04g01586 658 MobiDBLite consensus disorder prediction 224 265 - -
Gma04g01586 658 ProSiteProfiles Zinc finger C2H2 type domain profile. 198 225 IPR013087 -
Gma04g01586 658 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 117 658 - -
Gma04g01586 658 SUPERFAMILY beta-beta-alpha zinc fingers 465 586 IPR036236 -
Gma04g01586 658 ProSiteProfiles Zinc finger C2H2 type domain profile. 564 586 IPR013087 -
Gma04g01586 658 MobiDBLite consensus disorder prediction 144 184 - -
Gma04g01586 658 SMART c2h2final6 198 220 IPR013087 -
Gma04g01586 658 SMART c2h2final6 465 487 IPR013087 -
Gma04g01586 658 SMART c2h2final6 564 586 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01586 Gma-Chr4 43140509 43142941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01586 559 626 C2H2 Transcription Factor Family AT1G26610 49.275 9.36e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma04g01586 zf-C2H2_6 1e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01586 - - gmx:102662018 1011.13