Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01578 ATGATTTGTCAACTAAGTCCTACATGTGACCAAATCGCCAAAAGTTGTAGCTCTCCAACAACAACTCAACTTGCATTCTTATATGTTTCTTATGGCCTCATGGCCATTGGAACTGATGGTGTAAAGGCCTCTTCCTTAGCCTTTGGAATGGACCAATTATGCAGGAAGGAAAAAGATGCAGCAATCATAGAGAGCTACTTCAATTGGAGCTATGCTTCAGGCTTAGTGGCAGTCCTATTTGGAATCACTATTTTGGTTTATCTTCAAGAAAATCTAGGGTGGAAGCGATGGAATGATAAGGACAGGTTTATTGCAGTGATGGGTGTAAAAGGAAAACCAAGTTGCAATGCGAGAATTCCAATCCCTTTAACGGGGATAACGACAGGTTTATTGCAATTCCAAACATGGCGTTACCTAAACATGCACAATCTAATTGGGATGATTGTTAGTGTGGTTGTGGACGTGGTTGTTGGCATTGGTGTTCTCTTGGCCCTTCTTCTGTATGTCAAGATAAGGCAAAGAAAGAGAATGGTTAGAGCAGTGGAGGGTTCATTGGTGGCATTCAGGTACCAAGATTTGCAAAATGAAACGATGAATTTCTCTGAGAAATTGGGAGAAGGAGGATTTGGTTCTGTTTTCAAAGGAACATTGGGTGACACCAGTGTGGTAGCAGTGAAGAAGTTGGAAAGTACTAGTCATGTAGAGAAACATTTCCAAATGGAAACTACTAAATTAGGGAAAGTACAACATGTTAATCTCGTTAGGCTCCATGGATTCTGCTCCGAAGGTTGTTTTAGCCTCTTGCAAGAACAAAAAACCTCAATATATCATATTATCATAATTACATAG 849 0.4016 MICQLSPTCDQIAKSCSSPTTTQLAFLYVSYGLMAIGTDGVKASSLAFGMDQLCRKEKDAAIIESYFNWSYASGLVAVLFGITILVYLQENLGWKRWNDKDRFIAVMGVKGKPSCNARIPIPLTGITTGLLQFQTWRYLNMHNLIGMIVSVVVDVVVGIGVLLALLLYVKIRQRKRMVRAVEGSLVAFRYQDLQNETMNFSEKLGEGGFGSVFKGTLGDTSVVAVKKLESTSHVEKHFQMETTKLGKVQHVNLVRLHGFCSEGCFSLLQEQKTSIYHIIIIT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01578 282 Pfam Protein tyrosine and serine/threonine kinase 199 262 IPR001245 GO:0004672|GO:0006468
Gma04g01578 282 ProSiteProfiles Protein kinase domain profile. 198 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01578 282 Pfam POT family 11 95 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma04g01578 282 SUPERFAMILY Protein kinase-like (PK-like) 186 264 IPR011009 -
Gma04g01578 282 Gene3D Phosphorylase Kinase; domain 1 166 269 - -
Gma04g01578 282 Gene3D MFS general substrate transporter like domains 4 107 IPR036259 -
Gma04g01578 282 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 143 268 - -
Gma04g01578 282 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 143 268 - -
Gma04g01578 282 ProSitePatterns Protein kinases ATP-binding region signature. 204 227 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01578 Gma-Chr4 42876289 42877353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01578 6 95 Organic Solute Cotransporters AT3G16180 48.913 4.96e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma04g01578 PTR2 5.3e-09 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01578 - - gmx:102667456 184.111