Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01557 ATGACTGATTCCAAGGAAAAGAACAGGAAATTTGTGGAGACCATTGAACTCCAAATTAGGCTGAAAAACTATGATCCTCAGAAGGACAAGCGTTTTAGTGGCTCTGTTAAGTTGCGTCACATTCCTTGCCCCAAGATGAAGATTTGTATGCTTGGAGATGCCCAACATGTTGAAGAGGCTGAGAAGGTAGGATTGGACTACATGGATGTTGAGGCCTTGAAGAAGCTTAACAAAAACAAGAAATTGGTGAAAAAACTAGCCAAAAAATATCTTGTTACTCAACTTCTTCAACAAGTGATTATTAGTGTCAAACAATATCATGTACGAAATTAA 333 0.3784 MTDSKEKNRKFVETIELQIRLKNYDPQKDKRFSGSVKLRHIPCPKMKICMLGDAQHVEEAEKVGLDYMDVEALKKLNKNKKLVKKLAKKYLVTQLLQQVIISVKQYHVRN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01557 110 Gene3D - 1 104 - -
Gma04g01557 110 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 1 93 - -
Gma04g01557 110 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 1 93 - -
Gma04g01557 110 SUPERFAMILY Ribosomal protein L1 7 90 IPR023674 -
Gma04g01557 110 Pfam Ribosomal protein L1p/L10e family 6 91 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01557 Gma-Chr4 42175318 42176947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01557 4 71 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 85.294 3.09e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01557 K02865 - gmx:100499730 197.978