Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01554 ATGGCAGCAAAGCTCCTGCATTCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGCCACCATGTTCTCACGGCTCGCCGCATTAGCCAGAAGAGGCTTGCTTCTGGTAATTCTCCCTTCAGTGAGGGCAGCTTGGAAAGAGATTCTGATATCATACTCCATCAACAAACAGCAACTGATACTAGCTTAAACAAGGGTGTGAATGAAAGGCAAAGAATTTCTACCGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCATCGGTGTCCTCTCTGGACTGCAAGGCTGAAGCAGAGGCTCCATATGACCGGATTCTTTTTCCTGAAACTCCTTCAAGGGATGCAGTTATGAACCAATCTACCATCTCTCCCCATTTTGGATGTAACTCCCTTGATCTGAGGGATGTGGTGAAAGATTCAATGTATAGGGAAGCTCGAGGACTGTCATTGAGGACTACAGCCAAAGAGGAATCTGCCATTAATGCCACAAAGCACAGGGATTCACCGCGACCTATTCAGTTGTCCAAATCTGTTGATGGATCTTACAGAGTTGGAATAGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCCATCCGAGTCCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGCAGAAACTAAAGAACTTCCGAGATCATCACATGAAGTAAAAGATGGACACTGGCATTCCATCTCAAAGGGTGCTCCTTGGTTTCCTTATGAAGGTAAAGAAATAAGCCGTTTATCTTTTGAATCGCGAGAAACCATCAAATCCACACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGATAGTAAGGAAGGTTCATTGCGCAGTTACAGCACTGACTCAAAAGCCACTCACCACTCAAGAAACATTTACAGTGGCACCTCCACCTCAAATGACAAATTCCCTACCCTACAACAGCCTTCAGCAACCCCAAGTCGTCCACCTAGTGTTGTGGCAAAATTAATGGGCTTGGAAGCTTTACCGGATTCCTCTTTGGCTGGTGATGGTCAGTCAAGTTCAACTGAAACTTACTCAGCTCAAGATAATGGTCAATTCCCTAGATCATCAAAAAATGGACTCACCAGGCCACTCCGAGTTTCTAATTCTCCAAAAATGTCTTTGAAAGACCCAACTTCCCCACGGCGAAAGAATCATGATCTGGTTATGAAACCCATCCGAAGTTCAAGGGTTCCCATTGAACCAGCACCATGGAAGCAGCAAGATGGAAATCAAAGCTCCCAGAAACAGAATTTAAGGGGCGTAAAAGCTCCAACGAGAGCACCGGATTCCTTTCCTTCTGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTTAGAGCATTAAAACAGATACTTGAAGCAATGCAAGAAAAGGGACTATTAGAGAGCAGAAAAGAAGAACAAGCTCCAAATGTTGTTGGAAGTCAAAGTGACTATGAACCAAAAGCTACCAATCAAAATCAGAATACAAGGTCAGTAAGGCAACAAAACACTCAGAGAAACAATTTTCTATCTTCCACAGTCAAAGGATCTGACTCAGCAAGGGCTTTTGAATCCTCAATAGTGATAATGAAACCGGCAAAACTTGTTGAGACAACTGTGATTCCTGCTTCTTCAGTCATTCCAATTGGTGGCCTTTCTGGTTCCCAGAAACACCAGAATGGTGCTGTATATGTTGATAATAAAACCAGTACATCTACTACTCGAGTAGCAAAAGATAAGTCTCCCAGAAACATTCACCGGGATGTGTCTGCCAGTTCCATTGATAAGAAAGCAAGTAGTAGTAAGACTACAAGATTAATACAATCTCAATCTAGGTCTCAACAACTTCCAAAAGAAAATAGACAAAGTTCAGTGAAGCACTCAGGATCTGTGAGCCCAAGGTTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGGTCTCGTCCCCCTGCCCCACCATCAGATTCCAACAAACCCAGAAGGCAATCTGGTAAGAAGGCAACAGAATCGGGTTCACCAGGTGGAAGACAAAGACCCAAATCCCTCAACGTACCGCATGGTGATGAGCAATTGAGTGAGATTAGCAATGAACCAAGGAGTTTAAGTTTCCAGGGGGATGAAATTTCTCTGCAATCAAACAGTTTAACTGTCAACTCAAAGATGGATATGGAAGTCACAAGTAGTTTACAAACTGTTGAAATTGATGACAGCCAAAGCCCATCTTTGAAGGCTGTGAAGCAATTGATTTCAGAGACAGTGCAGAAAAAATCAACTCCAAGGTTGGATGAGGATGAGACAGTTGCAGAACTAGCAACAGATACCCCGGAACATCCAAGTCCTATCTCAGTTCTTGATGGCTCAGTGTACAGAGATGACATGCCATCCCCCGTAAAGCAGATATCTGAAGATTCAAAAGGTGAGGATGCTCAAGAATCCAAAGAAAATGAGATTAAAGATCAGTGGAACCCTGCAGATAGCCTTTCATTTAACTGCACTGGATCCCTAGAGATCAATCGCAAGAAATTACAGAACATAGACCACCTTGTCCAGAAGCTTCGACGACTGAACTCCAGTCACGATGAAGCTAGAATCGATTACATTGCTTCCCTATGTGAAAACACAAATCCAGACCACAGATACATTTCCGAAATATTATTAGCTTCAGGTCTCTTACTCAGAGATCTGAGTTCCGAGTTGCTGACATTTCAACTTCACTCGTCGGGTCATCCCATTAACCCCGAGCTATTCCTTGTCTTGGAACAGACCAAAGCAAGTAGTCTACTTTCAAAAGAAGAAAGCAGCCCTGGAAAAGATGCTAACATGAAGCTAAACAAAGAGAAATTTCACAGGAAACTCATCTTTGATTCTGTGAATGAGATTCTTGGTGCAAAATTCGGCTCCTCACCCGAGCCATGTTTTCAGCCTAACAGTAACAGACTCACAAAAAAAACCTTGAGTGCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATCGAAAAAATTCAAGCCAAGAAGCCAGAATGCTGCTTAGAAGATGATCATGATGGTCTGAAAAATATGCTGTGTGAAGATGTTATGCATGGCTCAGAAAGTTGGACAGATTTTCATGGTTACTTACCTGGGGTTGTGTTGGATGTTGAGAGACTGTTATTTAAGGACTTAGTAGATGAGGTTGTGATTGGTGAATCATCAGGTTTGCGAGTCAAGCCATCGGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 3306 0.4265 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHVLTARRISQKRLASGNSPFSEGSLERDSDIILHQQTATDTSLNKGVNERQRISTESSRASFSSCSSSVSSLDCKAEAEAPYDRILFPETPSRDAVMNQSTISPHFGCNSLDLRDVVKDSMYREARGLSLRTTAKEESAINATKHRDSPRPIQLSKSVDGSYRVGIDGKQSVPIDLKESIRVLAKLREAPWYYAETKELPRSSHEVKDGHWHSISKGAPWFPYEGKEISRLSFESRETIKSTPKLKELPRLSLDSKEGSLRSYSTDSKATHHSRNIYSGTSTSNDKFPTLQQPSATPSRPPSVVAKLMGLEALPDSSLAGDGQSSSTETYSAQDNGQFPRSSKNGLTRPLRVSNSPKMSLKDPTSPRRKNHDLVMKPIRSSRVPIEPAPWKQQDGNQSSQKQNLRGVKAPTRAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQAPNVVGSQSDYEPKATNQNQNTRSVRQQNTQRNNFLSSTVKGSDSARAFESSIVIMKPAKLVETTVIPASSVIPIGGLSGSQKHQNGAVYVDNKTSTSTTRVAKDKSPRNIHRDVSASSIDKKASSSKTTRLIQSQSRSQQLPKENRQSSVKHSGSVSPRLQQKKLELEKRSRPPAPPSDSNKPRRQSGKKATESGSPGGRQRPKSLNVPHGDEQLSEISNEPRSLSFQGDEISLQSNSLTVNSKMDMEVTSSLQTVEIDDSQSPSLKAVKQLISETVQKKSTPRLDEDETVAELATDTPEHPSPISVLDGSVYRDDMPSPVKQISEDSKGEDAQESKENEIKDQWNPADSLSFNCTGSLEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGHPINPELFLVLEQTKASSLLSKEESSPGKDANMKLNKEKFHRKLIFDSVNEILGAKFGSSPEPCFQPNSNRLTKKTLSAQKLLKELCFEIEKIQAKKPECCLEDDHDGLKNMLCEDVMHGSESWTDFHGYLPGVVLDVERLLFKDLVDEVVIGESSGLRVKPSVRRRKLFGK 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01554 1101 MobiDBLite consensus disorder prediction 777 838 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 424 439 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 616 657 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 395 409 - -
Gma04g01554 1101 Pfam DUF761-associated sequence motif 331 350 IPR032795 -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 777 792 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 709 728 - -
Gma04g01554 1101 PANTHER LONGIFOLIA PROTEIN 1 1099 - -
Gma04g01554 1101 PANTHER LONGIFOLIA PROTEIN 1 1099 IPR033334 GO:0051513
Gma04g01554 1101 MobiDBLite consensus disorder prediction 601 615 - -
Gma04g01554 1101 Pfam Domain of unknown function (DUF4378) 898 1078 IPR025486 -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 347 449 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 351 394 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 497 538 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 589 728 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 817 838 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 489 538 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 283 335 - -
Gma04g01554 1101 MobiDBLite consensus disorder prediction 290 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01554 Gma-Chr4 42118174 42123289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01554 138 1100 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.720 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01554 - - gmx:100787391 2112.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01554 04 42118174 42123289 Gma04g01554 04 42118174 42123289 ECH
Gma17g00753 17 6330424 6335069 Gma04g01554 04 42118174 42123289 PCT
Gma05g00191 05 1803921 1808437 Gma04g01554 04 42118174 42123289 PCT
Gma04g01554 04 42118174 42123289 Gma17g00753 17 6330424 6335069 PCT
Gma04g01554 04 42118174 42123289 Gma05g00191 05 1803921 1808437 PCT