Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01552 ATGTATAATCAAGTGAATCGCGGTTCTCATTTTGGGCAGAGTTCTGTCCCTCCGCTGCTGCCACCACCGCCACCACCACCACCGCCATATCAGCAAGCTCCGCCACATTTCCATCAATTCccaccatctaacgttggtggtcctcaaccaccaccaccacctaatattgggggtccaccgccgctgccacctcctaacattggtggtccaccaccacctccaccGCCTCATAATGTTTATTTACCCGGATCTGTGCCTCCACCTCCTCCTACTTCGTCTTCCTCAGTTTCCTTGAACCTTGCTGTTCAAGGTTGGCATAATGTGATGCCAAATTCAGGACAATCGTATGCTGTCCCTTCTCAATTACACCATGTAAACACCATGGGGCCACAAACATCTTGGGCTCCAGCGCCACCAACTAGAGTATTGCCGCCGCCACCACCACCTCCCTCGGCTTCCCAAGGACATATTTTGTATAACCCTCCTTTCCATGGTCCTCCTCTGCAGTCCGGTGATGTTCAGAATCTGCATAATGCTCCTCCACCACCACCTCCTTCAGTGTATTTCCATTCAACTGTTGGGAATTACCACGTGCCTTCTGGTGTTCCCCCACCATTGCCATCATCTCCACCACCTGTTCTGCCGGCTCCACCGCCAGTAACGTCTGCATCTTCAAATGGTGCACGCACTGATGACACTCACTCTGTGAAGGTTTCTGGCTTGGAATCAAAGGCTGCAGAACTGGTTGACGGAGTTGTAGCTTCTCATCCGTCTGGTGTTGTGCCTGTACATGGTTCTGATTCTAATTGGGATGGTGCAAGTTGTAGAGAGGTTGCTGGTGCTGGCAGAGATGAGGATCTTCCCCCACCCAAGCCAACAGAAGAAAAAACTGTGCAGAAGATTGAAGCTTTGTGTCAGCTTATTGCTGAGAAGGGTGCTGATATCGAAGATAAAATTTGTCAAGATGAATTTCAGAATCCTGAATATGCATTTTTCATTGGTGGAGACCCGGGAACTGAAGCTGCAATTGCTCACACTTATTTCCTGTGGATGAAGAAGAAATATAATTTGGATACTCGATGGCATGAAAAGAGAAGACAATCAGATATAGTATACTCTTCAGGGGAACAGTATCGTCTGCATGTTACAACCGTGAGTGCCGATTCTGACATGGAAATGGAAGATGATATCACACTTTCTGACAAGGACCAAGGTTCAAATTATGCCACTGAAGTCCTAACTCATGGACATAATCGGGATGATGAAGTGTTTAGCATGAATAAGAATATAAAGCAGCTGCAGAATTTAACAGAGAATGACCCTGCCAAGGACATCTCATCCTGCAGTGCATCATACTTTGGATCCCTGGGAGCCAGCAAACAGGATGGAGGACCAGAGATTTTATCTGAATCAGAGCACATCAAATCTGTAAGATCTGTTACCAAGGTTTGTAGTCCTGTGAATGACTCCACTAAAGTGGCTGAATTACCCCTGGGTGCAGCTTTGGAGAAATCTACAGCTCCTGTAGATGATGATTTCACACGTACCGGTACTTCTGATCACAATGAAACCACTACTACTGATAGAGATTCTGGGCTACTCATTAGTAGTGGCAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGATAATGAAGATGAAGGCAATGCTGCGGATGCTAATGTTTTCACGGTCTCAGGAGGTGCTGACACTGGTGTTTCAGCTGCACGTAAAGATTCTGGGAGTTATATGGAGACTGATATCGGATCTAAGATTCCTTCCAGTGCCCAAAAGGGGTTTGGACCGCTCTCCAGAAAATCGCAGGATGATTCAGAAATAGCTCCACATTTATTACGAGAGTCTAAGGAAACCCGTTACCGTAAAAAATCTGTCTCACGTTGGTCTAGTGAGCATAACCTCAAAAATCAGGTGTCTGCTTTAAAGGGCAAAGATGGATTAGAGAGTACTGGCATTGACAGTGGTAGTAAAAGTGGTAATGCTGAAAAGGAAGATGAGGGGAAAACCTCAAAGTTGGAACCAAATTTTCTGAAAGTTGATGAATTCGGGAGACATCTCAAAGAAGGTCTTACAGATAGTGACTCTGATGATTCACGCTATCATCAGACAAGCAGACTAAACAAAAGAGATAGAAGCTGGAGTCGCAGCCGGTCTCCTCCAGGCAGGAGGAGTAGGAGGAATAGGAGGAGTCCCTGCAGGAGAAGGGATAAAAGAAACAGGTCTCGCAGCTGGTCTCCCTGGCACCGAAGAAGTAGGAGTAGGTCTCCAATCTCAAGACGTTCAGGTGACTTTCGTGGTGAGAATGTGAAAAGGGACAAGGATCAGTGCTTGGACTTCCTTCGAGGAAAGTGCTATCGAGGAGCATCTTGCAAGTACATTCACAATGAATCTGACATGAATGCTACTTCAAGGCGCTATAGGAATAAACATGATCTGGAAGCCAGTTCTCGTGCAAAAGAATCTAAGATTAATGGAGACATGAAGAGTATTTCTTCTAAAGTGTTGGATAATGAGCGTGATGGATTCAGAAGTCAGGATGTGAATCTTTTCCAGAATGTAACTAGCCAGGAAGTAATGAAGAAAAAAGAAGATTCAGGAAGGCATGCTGTTGCATCAACTACCATTCATCTTGATGGTCAATCAGTTAATATCAATCTAAGTAAATCTGAATGTAGCAGAGAGGTTGCTCCTGAAAAGCTGGAAACCATAGTAGTGAGGGAGGAACCTAAGACTTTAATCCTTAAAAATGATGGTTTGAAAGCAGGGGATTCTCATCAGCAACACTTAGTTGATGGTTTTCACCCTGAAGCTTTAGGCAGTGGTGATGCTTCTAAACCATCTGGTACATATAAAGATGTCATTCCCTCAGAAGATGGTTCATTTGTTCGGCAAATGCAATTCAATGTTTCTGCTGTTGGAATTCCAGAACATTCTGGGTACATGTCTCAGCATGTGAATGCATCCTTTGTGACTGATTCATCACCTGATAAAAGATCAATTGTTTCTGCTAGTGTTAATGAAGCTCCTGGTAGTGAACTGTTACCATTGTTGTCATCAACTCAGCAACAGTCAGCCACTAGTTCTGTTGGGCAATGTGTCACATCAGAGCAGCCTTCATTGCACTCTGAGGCTTTTGAAGAGTTACCTCCACAGAGTGGTTCTTCTGGGGAATTACCGCTTCATACTTACCAGTTGCCAGCTTCTGCTGTTTCACATTTCCAGGGTGAAAATCCTGTGCATATGCCACAAATTTCAAGGCAGTATGGTGCAATGCAACAAAGTCAATTCTTTCCTTTCCAATCCACTACGAGAGAAAAGTTTGAACCTTACCCAGCTCCATTACACATGCAGAATGCTCACTTCAATGTACCACCTAATAGCTCTTGGACATCCTTGCCACTGCCACCACCACCGCCACCAGGCCCACCACCAAGAGCGGTGTATAATTCCAGTTTAAACTCAGGAGTTGTAAAATCATATATTTCTTCTGAATTCAATCAGAGTCAATTGCATTCAAGAACTGACTTTGTTTCTCAGACTTCCATGAAGTCTGGGTTACCAACTGGTTCTCAGAATTCTGAATTTCAGGATCAAGCATACCCTCCAATGCAGGATCATTCACTAATTTTCATGCTTACAGAACCTTTCTCTCCAAAGCATCTCCCTCAGGGGAACCCAGCTAGTCAATTGCCTTCAGGCTCTAATCTCAATAGAGATGATTTTCATAATCAACTTCCTATGCAGGATTCAAAATTTTCAAGTACCACATCATTTGGGAGCCTGCAGCCTCAATCAAATCAATTTTCCTGGAAGTTGGATGTGAACAGACTACAACCTACTCTGGGTGGCAAGTTGCCTCCAGAAGGACATCTTATGACATCTTCCCACATCGATTCATTATCACAGAAGCAACAACCAATGTATAATTTTCAATGTTCTGTATCCGAGGCTAATTTGGGTGTGCCTGGGGAGACTGTTACTGTTTCAAGATATCCATCTGATTTTCTGGATAGCAATCATTCAACTTCTCTTCCATCTTTTGGGGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTCAGTTCAAGTATTTATAGACAGGAAGATGAAATAATCCATGGTAACAATTATGCTTCTTCTAGATTGAACCATACTCCTGTAAATGGGGAAGGTGATGGTGTGGTTGGATTAAGACAGTCAGCTTCCTCATCAAAATCAGCTAGAGCTCTTGGTCAGATTTTACCTAGGTCTGGTGGTGACCAATATGACCCGATTTTTGACAGCATTGAACCATCATCCTCTTCTCTGAAAAAAATTGATTTTGATCAGAAGAAGGAAGTTACAGGTGAATCCAACATCAGCCTAAGGCCCAAAAGTTCTTACATGTCTTTGGACTCGGATGAGAAGAACAAGCAGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATATTGATGAATATGGTGAAACAGCAGATGCAGAAGTTGGTGCTGTTGAAAATGAGAGCCTAAGTGATGATGTGGATGTTGCAAAACTGACTTCAGGGGAGGTTGAGATTAATCAGGTCAAGTCTCCTGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCAATGAAATTGTTCAAAGTTTCCATTGCAAACTTTGTAAAGGAGGTTTTGAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTGGCTTTCAAAACCATTGTGAAAAAGACTGTGGATAAAGTGTCAGGAGCCATGAAAGGCCACCGTGTACCCAAGTCCCAAACGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGGTATGA 4926 0.4241 MYNQVNRGSHFGQSSVPPLLPPPPPPPPPYQQAPPHFHQFPPSNVGGPQPPPPPNIGGPPPLPPPNIGGPPPPPPPHNVYLPGSVPPPPPTSSSSVSLNLAVQGWHNVMPNSGQSYAVPSQLHHVNTMGPQTSWAPAPPTRVLPPPPPPPSASQGHILYNPPFHGPPLQSGDVQNLHNAPPPPPPSVYFHSTVGNYHVPSGVPPPLPSSPPPVLPAPPPVTSASSNGARTDDTHSVKVSGLESKAAELVDGVVASHPSGVVPVHGSDSNWDGASCREVAGAGRDEDLPPPKPTEEKTVQKIEALCQLIAEKGADIEDKICQDEFQNPEYAFFIGGDPGTEAAIAHTYFLWMKKKYNLDTRWHEKRRQSDIVYSSGEQYRLHVTTVSADSDMEMEDDITLSDKDQGSNYATEVLTHGHNRDDEVFSMNKNIKQLQNLTENDPAKDISSCSASYFGSLGASKQDGGPEILSESEHIKSVRSVTKVCSPVNDSTKVAELPLGAALEKSTAPVDDDFTRTGTSDHNETTTTDRDSGLLISSGSPIRLLQDYASDDTSDNEDEGNAADANVFTVSGGADTGVSAARKDSGSYMETDIGSKIPSSAQKGFGPLSRKSQDDSEIAPHLLRESKETRYRKKSVSRWSSEHNLKNQVSALKGKDGLESTGIDSGSKSGNAEKEDEGKTSKLEPNFLKVDEFGRHLKEGLTDSDSDDSRYHQTSRLNKRDRSWSRSRSPPGRRSRRNRRSPCRRRDKRNRSRSWSPWHRRSRSRSPISRRSGDFRGENVKRDKDQCLDFLRGKCYRGASCKYIHNESDMNATSRRYRNKHDLEASSRAKESKINGDMKSISSKVLDNERDGFRSQDVNLFQNVTSQEVMKKKEDSGRHAVASTTIHLDGQSVNINLSKSECSREVAPEKLETIVVREEPKTLILKNDGLKAGDSHQQHLVDGFHPEALGSGDASKPSGTYKDVIPSEDGSFVRQMQFNVSAVGIPEHSGYMSQHVNASFVTDSSPDKRSIVSASVNEAPGSELLPLLSSTQQQSATSSVGQCVTSEQPSLHSEAFEELPPQSGSSGELPLHTYQLPASAVSHFQGENPVHMPQISRQYGAMQQSQFFPFQSTTREKFEPYPAPLHMQNAHFNVPPNSSWTSLPLPPPPPPGPPPRAVYNSSLNSGVVKSYISSEFNQSQLHSRTDFVSQTSMKSGLPTGSQNSEFQDQAYPPMQDHSLIFMLTEPFSPKHLPQGNPASQLPSGSNLNRDDFHNQLPMQDSKFSSTTSFGSLQPQSNQFSWKLDVNRLQPTLGGKLPPEGHLMTSSHIDSLSQKQQPMYNFQCSVSEANLGVPGETVTVSRYPSDFLDSNHSTSLPSFGGSRISAHYNPYASTFEKPLSSKFSSSIYRQEDEIIHGNNYASSRLNHTPVNGEGDGVVGLRQSASSSKSARALGQILPRSGGDQYDPIFDSIEPSSSSLKKIDFDQKKEVTGESNISLRPKSSYMSLDSDEKNKQEEVGAVASTTSQNIDEYGETADAEVGAVENESLSDDVDVAKLTSGEVEINQVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQTKISQYIDSSQRKLTKLVMGYVDKYVKV 1641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01552 1641 MobiDBLite consensus disorder prediction 1028 1051 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 646 686 - -
Gma04g01552 1641 Gene3D Surp module 271 358 IPR035967 GO:0003723|GO:0006396
Gma04g01552 1641 MobiDBLite consensus disorder prediction 811 835 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 668 686 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 44 93 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 200 219 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 1 96 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 127 186 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 200 233 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 507 536 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 1467 1497 - -
Gma04g01552 1641 SUPERFAMILY Surp module (SWAP domain) 288 352 IPR035967 GO:0003723|GO:0006396
Gma04g01552 1641 MobiDBLite consensus disorder prediction 1419 1444 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 549 622 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 698 777 - -
Gma04g01552 1641 PANTHER EXPRESSED PROTEIN 1 1641 - -
Gma04g01552 1641 Gene3D - 779 834 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 1232 1270 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 1028 1069 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 1226 1270 - -
Gma04g01552 1641 ProSiteProfiles Zinc finger C3H1-type profile. 780 807 IPR000571 GO:0046872
Gma04g01552 1641 MobiDBLite consensus disorder prediction 698 727 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 137 155 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 508 527 - -
Gma04g01552 1641 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 1641 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 728 765 - -
Gma04g01552 1641 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01552 Gma-Chr4 42035025 42048671 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma04g01552 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01552 - - gmx:102668322 2899.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01552 04 42035025 42048671 Gma04g01552 04 42035025 42048671 ECH