Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01548 ATGGCGTTGCGCGCCGCTTCTTCAAACGCGCGTTTTCTCCTCAACACTCACTCCCAGTCCCACTACAGAAAACAAATTGCCCTCGCCACCCTCTTCCAGAAGCACGGTTTCccctcctccctcgtcccctccctcctctcccgcaacccctccctcctccgcacccccctcccCGACCTCCGACACTCCCTCTCCACCCTCCTCTTCTCCCTCCGCCTCCCCCAAAACGCCGTCGTCTCGCTCCTCACCTCCTCCCCTTCCCTCCTCCTCGACCCCACCTTCCTCAAAACCTTCCAATCACACTTCCCTGAAATCCAATCCCGCTTCCCCAAAATCTCCCCGTCAACCCTAGTCAACCTTCTTCTCTGCTCCCGTAAGTTCGATCTAAACCCCCTCGACCTCCCCCGCAAACTCGACCTCCTCAAAACCCGCTTCGCGTTCTCCGCCGCCACCGTGGCGAAGGTCCTGGAAGGGTTTCCCGACGTTCTTATAACAAGCGAGACTGAGATTACTAATGTAGTTGATTTTCTAGTGGAATTCGGAATCCCCGGGGATGAAATTGATCTTGTTGTTGGATTGTTTCCTAGGGTTTTGGGAATTGGAGTTGAGGACAGGCTGAGGCCGTTGGTTCGCGAAATTAAGGAGTTAGGGTTTACAAACCGCGAGCTGAGGAGAGAAATCTCGAGGGATCCGAGGATTCTGGGGATGGAAATTGGTGAATTCTCGCGGTGTCTGAGGCTGTTGGAGAGTCTAAAATGCAGGGAAGCGATCCAAGATAGGATCATGGGTTCGGGTATGGTGAGGGCGTGTTTTGAGGTGAAACTACGGGTGGATTGCTTGTGTGGTTACGGTTTGACGCGAAACGATGCTTTGAAGGTGTTATGGAAGGAGCCGAGGGTGATTTGTTATGAGGTTGGGGATATTGAGAAGAAGGTTGAGTTTTTGGTGCAGAGGATGAAGTGTGGTGTGGAGTGTGTGGTTGATGTGCCTAAGTACTTGGGTGTGAGCTTTGAGAAGCATATTGTGCCGAGGTACAGTGTGGTGGAGTGCTTGAGAGGGAAGGGTGCAATCGGGTTTGAGGTTGGGTTGAAAGATTTGGTCATGCCTTCTAGGCTTAGGTTTTATAATCTCTATGTGAAGCCATACCCGGAGTGTGAGAAGATATATGGGAGGTTGAAGGGGTGTGGTGGTGAAGGTAAGAGGAAGCATCCGGTGGGGCTGTGGAAGCTGTTTAAACCAGAGAAGTTTCCTGAGAGTGGCGAGGATGTGAAGAATATGAGGTCCTTCATGGAGTCACTGGTTTAG 1305 0.4904 MALRAASSNARFLLNTHSQSHYRKQIALATLFQKHGFPSSLVPSLLSRNPSLLRTPLPDLRHSLSTLLFSLRLPQNAVVSLLTSSPSLLLDPTFLKTFQSHFPEIQSRFPKISPSTLVNLLLCSRKFDLNPLDLPRKLDLLKTRFAFSAATVAKVLEGFPDVLITSETEITNVVDFLVEFGIPGDEIDLVVGLFPRVLGIGVEDRLRPLVREIKELGFTNRELRREISRDPRILGMEIGEFSRCLRLLESLKCREAIQDRIMGSGMVRACFEVKLRVDCLCGYGLTRNDALKVLWKEPRVICYEVGDIEKKVEFLVQRMKCGVECVVDVPKYLGVSFEKHIVPRYSVVECLRGKGAIGFEVGLKDLVMPSRLRFYNLYVKPYPECEKIYGRLKGCGGEGKRKHPVGLWKLFKPEKFPESGEDVKNMRSFMESLV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01548 434 PANTHER CGI-12 PROTEIN-RELATED 40 432 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 Pfam mTERF 68 241 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 Pfam mTERF 275 367 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 Gene3D Transcription termination factor 3, mitochondrial 167 391 IPR038538 -
Gma04g01548 434 SMART mt_12 153 183 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 SMART mt_12 43 74 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 SMART mt_12 224 254 IPR003690 GO:0003690|GO:0006355
Gma04g01548 434 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 40 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01548 Gma-Chr4 41934156 41935884 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma04g01548 mTERF 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01548 - - gmx:100783135 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01548 04 41934156 41935884 Gma04g01548 04 41934156 41935884 ECH