Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01544 ATGGAATTTGTTAACGGTAAACAGCAGCCAAAGAGCACATTTACATGCTTGAAGTTGGTTGCCTTAATTGCTCTATACCTCGTCTTAATTTCTCCAGCAGaatcaTTTGATCCGTTGGATCCAACCGGGAACGTGACAATAAGATGGGATATAATGTCCTGGACATCAGATGGTTATTTGGCCACTGTGACATTGTTTAACTTCCAACTATACCGCAATATTATGAATCCTGGGTGGACACTAGGGTGGACATGGGCAAAGAAGGAAATAATCTGGGCCATGATGGGAGCTCAAGCCACAGAACAAGGAGATTGTGCAAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTCAAGTGGTTGACTTGCTACCTGGAGCTCCTTTTAACACGCAGTTCACAAACTGCTGCAAGGGTGGTGTGCTTACATCTTGGGGGCAGAACCCTTCAGGTGCAGTCTCAGCATTTCAGATAGGTGTTGGCCTCTCTGGCACCTCTAACAAGACAGTCAAATTGCCCAAAAACTTCAAATTGCTAGGACCAGGACCAGGATACTCATGTGGCCCAGCCAAGATTGTTCCATCCACTGCCATCCTCACAGAAGATCGTAGGCGAAAAATGCAAGCACTGATGTCCTGGAATGTGACATGCACGTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGTTGTCAAAATAACGATACTTGTGTCACGAAAGATTCAAAGATCCTGCAACAGAATGTCACGTCACCTCACCAAAAATCAGACATCACACTCACACCAAAACCATTATTACAATGCACACACCACCTGTGTCATGTCAGGGTGCACTGGCATTTGAAAGACAACTATAAGGACTATTGGCGTGTCAAGATTGCCATCATCAACTTCAACTATCGGTTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCTAATCTCAATAATGTCACCCAAGTCTACAGCTTTGAATACATGCCACTTCTTCCCTATGAATCCACAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGATGGGCATTTCCTAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATATCCTATGCTGCCAAACTCTGCCCATAAACTACCAACAACTATTACATTGATGGCAGCCTATGTGGTTTTTACATTATTCTTTCATTTGGTTGTAACACTTTTTTGA 1377 0.4379 MEFVNGKQQPKSTFTCLKLVALIALYLVLISPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLLPGAPFNTQFTNCCKGGVLTSWGQNPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKIVPSTAILTEDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNDTCVTKDSKILQQNVTSPHQKSDITLTPKPLLQCTHHLCHVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESTNDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKLPTTITLMAAYVVFTLFFHLVVTLF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01544 458 PIRSF COBRA 8 457 IPR006918 GO:0010215|GO:0031225
Gma04g01544 458 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Gma04g01544 458 PANTHER PROTEIN COBRA 1 458 IPR006918 GO:0010215|GO:0031225
Gma04g01544 458 PANTHER COBRA-LIKE PROTEIN 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01544 Gma-Chr4 41845738 41847910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01544 30 452 COBRA Gene Family AT3G02210 58.451 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01544 - - gmx:100780434 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01544 04 41845738 41847910 Gma04g01544 04 41845738 41847910 ECH