Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01507 ATGGAATACTGCGCACCTCTCTATCAGGTAAATAGTTCTGGAGTAATGCCTATCATATTTTCTACATCATCATTAGCTCTTCCTGGTACTTTAGCGCGCTTCACTGGTTTAACTGCACTAAAGAAGGCTTCAGTGGCGTTAAATCCAGGAGGTTCCTTCTACCTTCCATTTAACATACTTTTGATAGCCTTCTTCAACTACTATTACACTTTCCTACAACTGGATCCTGATGACGTGAGTGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTTGTCAGACCAGGCAGAAGTGCAGCTACATTTATCAAAACAGTTCTTAGTAGAATATCAGTTCTGGGTTCAACATTTTTGGCTATCTTGGCTGCTGGTCCAACAGTTGTTGAACAGATCACTCACTTGACCGCATTCCGGGGATTTGTAGGAACATCTATTCTTATTCTTGTTGGTTGTGCAACAGACACAGCAAGAAAAGTTCAAGCTGAGATTATATCCCAAAAGTACAAGAACATAGAGTTCTATGATTTTGATAAGTATTGA 540 0.3981 MEYCAPLYQVNSSGVMPIIFSTSSLALPGTLARFTGLTALKKASVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSAATFIKTVLSRISVLGSTFLAILAAGPTVVEQITHLTAFRGFVGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01507 179 PRINTS Preprotein translocase SecY subunit signature 13 32 - -
Gma04g01507 179 PRINTS Preprotein translocase SecY subunit signature 52 74 - -
Gma04g01507 179 PRINTS Preprotein translocase SecY subunit signature 107 125 - -
Gma04g01507 179 PRINTS Preprotein translocase SecY subunit signature 141 159 - -
Gma04g01507 179 Gene3D SecY subunit domain 7 168 IPR023201 -
Gma04g01507 179 SUPERFAMILY Preprotein translocase SecY subunit 9 162 IPR023201 -
Gma04g01507 179 Pfam SecY 9 155 IPR002208 GO:0015031|GO:0016020
Gma04g01507 179 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 2 177 - -
Gma04g01507 179 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 2 177 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01507 Gma-Chr4 39258616 39260384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01507 8 179 Chloroplast and Mitochondria Gene Families AT2G18710 86.628 1.08e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01507 K10956 - gmx:100808959 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01507 04 39258616 39260384 Gma06g02029 06 29425096 29429284 GST