Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01506 ATGTCGACATGGAGGGAGAACACCACCCTCAAAATGCCTGGGCTACTCAACACCAATGAGCACCACGATCGTAGAACACAGACTCCCGGTGCGGAGGAAGAAGACGACGCTCACGGCGGGAACGCGGCGCGGAGGACCGAGGGTTTTAAGGGATCCAATTCCAGCTTCCTCTTTCCCATGGAATTGAAAAAGGGCAAGCTTGCCAGGTTCTACACGGATGGTAAAAAGCATAAGCAATCGTTTTGGGGAGCAAGAGCAACTGAGCCTCCAGCACTTAAACCTAGCAATTTGCTACCACTAGGGAAAAATAGAATTGCTGAAACATTTAGAATTGGAGGATCGAAGGTGTTCCCGGAGGACCATGAGCCGTGGCGTAAAAGAATACTTGACCCGGGTAGCGATATTGTGTTGAAATGGAACCGGGTCTTCATAGTTTCATGCCTGGTGGCTCTTTTTGTTGATCCATTGTACTTTTATTTGCCTAGTGTAATAGAAAACACAGGGTCTACATGTGTAAGGACAGACCTAACACTGCGCATTGTCGTGACCTTTCTTCGCACTATTGCAGACCTTTTTTATCTGTTGCACCTGATAATTAAGTTTAGGACGGCATATGTGGCACCAAGCTCACGGGTATTTGGCAGGGGTGAACTTGTCATGGACCCAAAGAAGATTGCAAGGAGATATATAAGATCTGATTTCTTCATTGATTTTATTGCCACACTCCCTCTACCTCAGATGGTCATTTGGTTTATTATACCAGCAACAAGAACCCCTCAAACTGATCACAAGAATAATGCGCTTGCATTGATTGTTTTGCTTCAATATGTTCCGAGATTATATTTGATTTTTCCATTAAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACGAAGACTGCTTGGGCAGGAGCTGCATATAATTTGCTGTTGTATATGTTAGCTAGCCATGTTTTAGGGGCAGCTTGGTATCTTCTATCCGTGGACCGATACACTACTTGTTGGAAATCCTTTTGCAAAAAGGAACATGATCCTGAAAATTGCTTTCTTTATCTAGACTGCACTTCGTTGAATATTAAGCTGCGCGAGATATGGGCAAATAGTACAAGTGTGTTTAGCAGCTGTGATCCCAGTAATGATAATATTAATTTCAAGTATGGAATATTTGAAAATGCAGTAAAGAAACATGTTGTCTCTTCAAACTTTATCCCAAAGTACCTTTATTGTTTATGGTGGGGATTGCAACAATTAAGTTCTTATGGGCAGAATCTAGAAACTAGCACGTTTATTGGAGAAACATCATTTGCTATTGTCATTGCCATCTTGGGTCTTGTATTATTTTCCCATTTAATTGGGAACATGCAGACTTATTTGCAATCAATTACTATAAGGCTTGAGGAGTGGAGGCTTAAGCGAAGAGACACAGAGGAGTGGATGAGGCATCGCCAACTCCCTGAAGATTTGAGAAGTCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCTACTCGTGGAGTTGATGAGGAAACCATTCTACGTGCCTTACCTGCTGATCTTCGCCGTGATATACAGCGGCATTTGTGCTTAGACCTTGTTAGAAGAGTTCCCTTCTTCTCACAGATGGATGATCAGCTTCTGGATGCAATATGTGAGCGGCTGGTATCGTCTCTGAGCACTCAAGGCACCTACATTGTTCGTGAGGGTGACCCGGTGACTGAAATGCTTTTTATCATTAGAGGTAGACTGGATAGTTCTACTACAAATGGCGGCCGTAGTGGTTTCTTCAACTCAATCATATTGAGACCTGGAGATTTTTGTGGGGAGGAACTTCTTTCTTGGGCTTTACTCCCCAAATCCACCATTAATTTGCCTTCTTCAACTAGGACAGTTAAAGCCCTAAGTGAGGTTGAAGCTTTTGCTCTTCGGGCCGAAGACCTCAAGTTTGTTGCTAATCAATTTAGGCGCCTTCACAGTAAGAAGCTGCAGCACACTTTTCGATTTTATTCCCACCATTGGAGGACTTGGGCAGCTTGCTTTATACAGGCTGCTTGGCGCCGATATAAGAAAAGGATGACTATGAAAGACCTCAGTTTGAGGGAAACCATTCCTTTAGACGAAGCAGTAGCTGGTGAGAGAAAACATGGGGACTATTCTGCTGGTTCAAATTCAACTCAGACTAAATTGAACCTTGGGGCTACAATTCTTGCTTCGAGATTTGCTGCTAACACACGAAGAGGGGCTCTGAAGATGAAAGATGACATGCCCCAGTTACAGAAGCCTGAAGAACCTGACTTTTCCACTGAAGCTGACGATGATTAG 2319 0.4329 MSTWRENTTLKMPGLLNTNEHHDRRTQTPGAEEEDDAHGGNAARRTEGFKGSNSSFLFPMELKKGKLARFYTDGKKHKQSFWGARATEPPALKPSNLLPLGKNRIAETFRIGGSKVFPEDHEPWRKRILDPGSDIVLKWNRVFIVSCLVALFVDPLYFYLPSVIENTGSTCVRTDLTLRIVVTFLRTIADLFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPKKIARRYIRSDFFIDFIATLPLPQMVIWFIIPATRTPQTDHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYTTCWKSFCKKEHDPENCFLYLDCTSLNIKLREIWANSTSVFSSCDPSNDNINFKYGIFENAVKKHVVSSNFIPKYLYCLWWGLQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPEDLRSRVRRFVQYKWLATRGVDEETILRALPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRSGFFNSIILRPGDFCGEELLSWALLPKSTINLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMTMKDLSLRETIPLDEAVAGERKHGDYSAGSNSTQTKLNLGATILASRFAANTRRGALKMKDDMPQLQKPEEPDFSTEADDD 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01506 772 PRINTS EAG/ELK/ERG potassium channel family signature 450 459 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma04g01506 772 PRINTS EAG/ELK/ERG potassium channel family signature 500 507 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma04g01506 772 PRINTS EAG/ELK/ERG potassium channel family signature 197 206 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma04g01506 772 PRINTS EAG/ELK/ERG potassium channel family signature 314 324 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma04g01506 772 PRINTS EAG/ELK/ERG potassium channel family signature 432 443 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma04g01506 772 MobiDBLite consensus disorder prediction 1 15 - -
Gma04g01506 772 Gene3D Helix hairpin bin 465 528 - -
Gma04g01506 772 SMART cnmp_10 537 668 IPR000595 -
Gma04g01506 772 MobiDBLite consensus disorder prediction 747 772 - -
Gma04g01506 772 Pfam Cyclic nucleotide-binding domain 560 648 IPR000595 -
Gma04g01506 772 Gene3D - 142 462 - -
Gma04g01506 772 MobiDBLite consensus disorder prediction 1 50 - -
Gma04g01506 772 ProSiteProfiles cAMP/cGMP binding motif profile. 537 667 IPR000595 -
Gma04g01506 772 SUPERFAMILY Voltage-gated potassium channels 131 459 - -
Gma04g01506 772 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 97 769 - -
Gma04g01506 772 Gene3D Jelly Rolls 535 655 IPR014710 -
Gma04g01506 772 Pfam Ion transport protein 139 463 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma04g01506 772 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 97 769 - -
Gma04g01506 772 SUPERFAMILY cAMP-binding domain-like 467 659 IPR018490 -
Gma04g01506 772 MobiDBLite consensus disorder prediction 17 43 - -
Gma04g01506 772 CDD CAP_ED 537 668 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01506 Gma-Chr4 39231789 39245675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01506 60 771 Ion Channels AT4G30360 69.505 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01506 K05391 - gmx:100808425 1442.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01506 04 39231789 39245675 Gma06g02030 06 29430728 29439790 GST