LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma04g01491	ATGAGCTATCTCTATCCAGCGACAGATCGGAGCAGACCCTGTATGGAGTGGCGAATGGCGCTGTGGTCTCAAATTTTATGCATAGTCACTCTGCTGTTATGCAGCGATTGTGCAGCATCTTTTGCCAAGGAGCAGCAAAAGGACCGGGTTGGTAGGCTCCCAGGTCAAGGCTTCAACATCAGCTTCGCACACTATGCTGGGTACATCACCGTCAATGAGAAAGCTGGGAGAACACTCTTCTACTGGTTCATTGAGGCACTTGAAGATCCTCATTCTAAGCCCCTTGTTTTGTGGCTCAATGGAGGGCCTGGATGTTCGTCCATTGCTTTCGGACAGTCAGAAGAAGTTGGGCCTTTTCATATAAATTCAGATAGCAAGACCCTCCATTTCAATCCCTATTCTTGGAACCGAGTTGCCAACATTCTTTTTCTTGACACTCCTGTTGGGGTTGGATTTTCATATTCGAATAACAAATCCGACATGCTGATCAATGGCGATGAGAGGACAGCTGAGGACAATTTAGTATTTCTATTGAATTGGTTTGAGCGTTTCCCTCAATATAAAAGAAGCAACTTTTTCATCAGTGGTGAGAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGTTATTGTAAAGTACAACTCGGTTACAAAAGAAAATGCTATAAATCTGAAAGGTTTCATGGTAGGAAATGCTCTAACAGATGATTTCCATGATCAATTGGGAATGTTTGAGTTTATGTGGTCAAGTGGTTTGATTTCGGATCAAACATACAAGCTTTTGAACCTACTATGTGATTTTCAGTCAGTTGAGCACCCGTCACATTCATGCGAAAAAATCTGGGAAATTGCTAATGAAGAACTTGGAAATATAGACCCATACAGTCTCTTTACTCCTCCGTGCCAACATGCTAATGTTAGCCAGTTAAGTCGGCTGGTGAGAAGAAAGCATAGAATTGGTAGACTCAGTGCAGAGTATGATCCATGCACTGAAAAGCACTCCATTGTATACTTCAATCGACCTGATGTCCAAACAGTTCTTCATGTTGATCCAGATCATAAGCCTGCTACATGGGAGACCTGCAGTGATGAGGTATTTACAAACTGGAAGGATTCTCCAAGAACAGTGCTCAATATTTATCATGAACTTATTCAGATGGGATTGAGGATATGGGTGTTCAGTGGTAATACAGACGTGGTAATACCCGTGACATCTACTCGCTATAGCATAAAAGCTCTCGACCTTCCTACTGTGAGTCCTTGGCGAGCATGGTATGATGATGGGGAGGTGGGAGGATGGACTCAAGAATATGCTGGCCTTACGTTTGTGGTTGTAAGGGGTGCGGGGCACGAAGTTCCTTTGCATTCACCAAAACTTGCTTTGACACTGTTCAAAGCCTTCCTAGCAGGAACATCAATGCCCAATCTTGAGCTAGTCGGTGCCTCCTGA	1452	0.438	MSYLYPATDRSRPCMEWRMALWSQILCIVTLLLCSDCAASFAKEQQKDRVGRLPGQGFNISFAHYAGYITVNEKAGRTLFYWFIEALEDPHSKPLVLWLNGGPGCSSIAFGQSEEVGPFHINSDSKTLHFNPYSWNRVANILFLDTPVGVGFSYSNNKSDMLINGDERTAEDNLVFLLNWFERFPQYKRSNFFISGESYAGHYVPQLSQVIVKYNSVTKENAINLKGFMVGNALTDDFHDQLGMFEFMWSSGLISDQTYKLLNLLCDFQSVEHPSHSCEKIWEIANEELGNIDPYSLFTPPCQHANVSQLSRLVRRKHRIGRLSAEYDPCTEKHSIVYFNRPDVQTVLHVDPDHKPATWETCSDEVFTNWKDSPRTVLNIYHELIQMGLRIWVFSGNTDVVIPVTSTRYSIKALDLPTVSPWRAWYDDGEVGGWTQEYAGLTFVVVRGAGHEVPLHSPKLALTLFKAFLAGTSMPNLELVGAS	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma04g01491	483	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	24	477	IPR001563	GO:0004185\|GO:0006508
	Gma04g01491	483	Pfam	Serine carboxypeptidase	54	470	IPR001563	GO:0004185\|GO:0006508
	Gma04g01491	483	Gene3D	-	330	368	-	-
	Gma04g01491	483	Gene3D	alpha/beta hydrolase	44	304	IPR029058	-
	Gma04g01491	483	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 29	24	477	-	-
	Gma04g01491	483	Gene3D	-	377	471	-	-
	Gma04g01491	483	PRINTS	Carboxypeptidase C serine protease (S10) family signature	131	143	IPR001563	GO:0004185\|GO:0006508
	Gma04g01491	483	PRINTS	Carboxypeptidase C serine protease (S10) family signature	144	154	IPR001563	GO:0004185\|GO:0006508
	Gma04g01491	483	PRINTS	Carboxypeptidase C serine protease (S10) family signature	180	205	IPR001563	GO:0004185\|GO:0006508
	Gma04g01491	483	PRINTS	Carboxypeptidase C serine protease (S10) family signature	441	454	IPR001563	GO:0004185\|GO:0006508
	Gma04g01491	483	SUPERFAMILY	alpha/beta-Hydrolases	50	474	IPR029058	-
	Gma04g01491	483	ProSitePatterns	Serine carboxypeptidases, histidine active site.	441	458	IPR033124	GO:0004185
	Gma04g01491	483	ProSitePatterns	Serine carboxypeptidases, serine active site.	194	201	IPR018202	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma04g01491	Gma-Chr4	38599594	38606996	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma04g01491	388	474	Calmodulin-binding Proteins	AT2G22960	27.273	5.03e-10	57.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma04g01491	K16297		-	gmx:100805227	1002.28