Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01476 ATGCAGCAAGGTGATCCAACGGTCCTAAGCTTGAGGCCTGGTGGTGGTCGTGGCGGCGGAAGCAGGCTTTTCGGTCACTCCTCCTCCTCTCTCTCCGCCGATCTCCCTCTCTGCCGCCCTCATGCCTATTTCTCTCTCAAGACCAGAGATTCACGGTTTGAGGGTCATGAGCGTGTGCGATATAGCAGAGATCAGCTTTTACAGCTTCAAGAGGCTGTTGAGGTCCCTGATGATATACTAAAGATTAAACAAGATATAGAAGCTGAAATTTTTGGTGAAAATCCAAGTTGGGGCCGTGCTGAAAGCAATCTTCCTCATCAATTACAAAATCGGTATTCTGAGCCAGATAACCGTGATTGGCGTGGTCATTCTGGACAACTTCCTGCTAATTCAGATGAGAGGTCTTGGGAAAACCTCAGAGATAACAGGGAGTTTGGTAATAGACAGCAGGATGCTAGTCAGGTTAATCGTCATGACCAACTTAATTCCCAGTTTGCTAGAACACAAATCTCTTCTATGCAAGGGGGAGGACCTACTCCTACGCTGGTCAAGGCCGAGGTTCCGTGGTCTGCTAGAAGGGGAAGTCTATCTGAAAAGGATCGCGTCATAAAAACTGTGAAAGGAATACTGAATAAGTTGACTCCTGAAAAATTTGATATCCTGAAGGGTCAGTTAATCGATTCTGGCATTACATCAGCTGACATCTTAAAGGATGTCATTTCACTTATTTTTGATAAGGCTGTTCTAGAACCAACATTTTGCCCCATGTATGCTCAGCTCTGTTCTGATCTAAATGAAAAGTTGCCTCCATTCCCATCTGAAGACCCTGGTGGGAAAGAAATCACCTTTAAGAGAGTGCTCTTGAATAATTGCCAGGAGGCATTTGAAGGTGCTGAAAATCTGAGGGAGGAACTAAAAAGGATGACTGCCCCTGAGCAGGAGATGGAGCGTATGGACAAGGAAAGGCTGCTCAAGCTTCGTACCCTTGGAAATATCCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGCAGGAGCTTTTAGGATCCCCAGACAGCATGTTTTGTCCAGTTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCTTAAATCGCGGCGTATAAATGACGTTTACTTTAGCCGATTGAAAGAATTAAGCTCAAACCTACAACTTGTACCCCGACTTAGGTTCATGATTCGGGATGTTATAGAGTTGCGTGCTAGTAACTGGGTTCCTAGACGCGAAGAGGTCAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGGCCAGGTGCAACTGCAAGTATGAGAAATCCCCGTGGTGGTGTTCAAGGAAATGCCAGCTCTGGGGGTTTTCCTATTGCCCGACCTGGTGCAGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGGATTTGATAATGGCAACTGGGAGATGCCTAAGACTAGATCTATGCCAAGAGGAGATTTGCCAGGTGTTCAAGCTGCTGGACAGAGCAACTCTGCTTTACTTTCCAAGTCCACGACCCTCAATTCAAAACTGCTACCTCAAGGTAGTGGTGGTATTATAAGTGGAAGAAATAGTGCCCTAGTACATGGAGGTGGTACAAACTTTGGTTTAGGACCTGAGGCAGCACCTCAACTCTCTTCACCTGCTAAAACAGCCACTCCTGTTCCTGTATCCTCTGAGAAGCCACAACATCCAGCTGCAAGATTGAATACTGATAATCTTCGCTGCAGAACTGTCTCTCTTCTAGAAGAATATTTCAGTGTTCAGCTTTTGGAAGAGGCATTACAGTGTGTGGAGGAATTAAAATCTCCTTCTTACCACCCTGAGGTTGTTAAGGAAGCCATTTCCCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTTGCCAATCTCATTGAGTATCTGTATATTAAGAAGATTCTTACCCCTATAGACATAGGGACTGGCTGTTTGTTATTTGGTTCTCTACTGGATGATATTGGTATAGATTTACCTAAAGCACCAAGTAATTTTGGTGAGATAATTGGAAAACTAATTTTGGCTGGGGGATTGGATTGTAAGCTGGTGAGAGAGATTCTCAAGAAGGTGGATGATGGCATGTTCCAGAGAGCAATATTTGACAGTGTGGTGGGGGCCATTAGATCTGCATCTGGGCAAGCCGTGTTGGATGCTCAAACATCTGATATTGAGGCCTGCCAGAGTATGCTCAAGTGA 2328 0.4489 MQQGDPTVLSLRPGGGRGGGSRLFGHSSSSLSADLPLCRPHAYFSLKTRDSRFEGHERVRYSRDQLLQLQEAVEVPDDILKIKQDIEAEIFGENPSWGRAESNLPHQLQNRYSEPDNRDWRGHSGQLPANSDERSWENLRDNREFGNRQQDASQVNRHDQLNSQFARTQISSMQGGGPTPTLVKAEVPWSARRGSLSEKDRVIKTVKGILNKLTPEKFDILKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEDPGGKEITFKRVLLNNCQEAFEGAENLREELKRMTAPEQEMERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQQELLGSPDSMFCPVEENVEAICQFFNTIGKQLDESLKSRRINDVYFSRLKELSSNLQLVPRLRFMIRDVIELRASNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNPRGGVQGNASSGGFPIARPGAGGLMPGMPGTRKMPGMPGFDNGNWEMPKTRSMPRGDLPGVQAAGQSNSALLSKSTTLNSKLLPQGSGGIISGRNSALVHGGGTNFGLGPEAAPQLSSPAKTATPVPVSSEKPQHPAARLNTDNLRCRTVSLLEEYFSVQLLEEALQCVEELKSPSYHPEVVKEAISLALDKSPPCVEPVANLIEYLYIKKILTPIDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAGGLDCKLVREILKKVDDGMFQRAIFDSVVGAIRSASGQAVLDAQTSDIEACQSMLK 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01476 775 Gene3D - 604 771 - -
Gma04g01476 775 MobiDBLite consensus disorder prediction 1 25 - -
Gma04g01476 775 SUPERFAMILY ARM repeat 606 748 IPR016024 -
Gma04g01476 775 SMART if4_15 203 430 IPR003890 GO:0003723|GO:0005515
Gma04g01476 775 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 774 - -
Gma04g01476 775 MobiDBLite consensus disorder prediction 578 603 - -
Gma04g01476 775 ProSiteProfiles MI domain profile. 610 732 IPR003891 -
Gma04g01476 775 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 774 IPR045208 GO:0003743
Gma04g01476 775 Pfam MIF4G domain 204 430 IPR003890 GO:0003723|GO:0005515
Gma04g01476 775 MobiDBLite consensus disorder prediction 109 134 - -
Gma04g01476 775 Pfam MA3 domain 615 723 IPR003891 -
Gma04g01476 775 SUPERFAMILY ARM repeat 197 433 IPR016024 -
Gma04g01476 775 SMART ma3_7 611 723 IPR003891 -
Gma04g01476 775 Coils Coil 288 308 - -
Gma04g01476 775 Gene3D - 194 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01476 Gma-Chr4 37318705 37325516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01476 1 773 Eukaryotic Initiation Factors Gene Family AT5G57870 62.594 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01476 K03260 - gmx:100800438 1470.68