Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01452 ATGGAGACTGTTGTCAACTCATGTCCGCCTAATCATGTTGCTACTGTTGAACCGCCTATGGGGTTTGCATTTAAGACTTTGGAAACCAACAGTGAGGGGAAATTTGGTCACAGTACACCGCGATGGATTGAACTGAAGGAGATGACTCTCGAGGAATATGAAAAAGTACTAGAAGAGAGAAGGAAGGCTTTCCACGCACTTAAGACTGAGGAGAGAAAGGTCCTTGAGCGGGATGAAATTATGAATAAATTCTACAAGGTGACAGCTCAGTTGGAACAGTCGTTGGGTGGTATTTCCTATGATAAACTTGATATATCAGATGAAGTTAAAGAGCATGTTGAGTTGGTTCTTGCCCAGTTTAGAAGAGCTAACGGGAGGGTTGATGAACTAGCTGTTAGCCCTTTCGTTGAAGGGGTAATTTGCCAATATAAGTGCGAGAAAGGAATGTCATTTTTTAAGGAGAATTTGTACAAGCTTCAGGATGAAAATGCAGAACATATGCCTATCGGGTTTGAAGTTGCTTTCCCCTCTCTTCTCGATCATGCAAGAAGTTTGAATATTGAAGTGCCAGATGAGTCTAGTATCTTGAAAAACATCTTTGCAATGAGGGACCTCAAGCTTAAGAAAATACCGAGACAGGTTCTGCACAAGGAGCCTACAACACTGCTCCATAGTTTAGAGGATGTTGTAAAGGCTGATGTCCTCTATTTACTCTCTGGTGCGTGGAAACCATCAGTGGAGCGAATTTTCCTTTGGATTGGAGGCTCTCGTCCATCGCAGCTTCTAAACATCATCGTGCCTCAACTTGAGCCTTTGATTGATCAACAAATTGTTAGTATTAACAACCTCCGCCTATCGTCTCAACAAGCTGAAGATGCTCTTTGA 885 0.4249 METVVNSCPPNHVATVEPPMGFAFKTLETNSEGKFGHSTPRWIELKEMTLEEYEKVLEERRKAFHALKTEERKVLERDEIMNKFYKVTAQLEQSLGGISYDKLDISDEVKEHVELVLAQFRRANGRVDELAVSPFVEGVICQYKCEKGMSFFKENLYKLQDENAEHMPIGFEVAFPSLLDHARSLNIEVPDESSILKNIFAMRDLKLKKIPRQVLHKEPTTLLHSLEDVVKADVLYLLSGAWKPSVERIFLWIGGSRPSQLLNIIVPQLEPLIDQQIVSINNLRLSSQQAEDAL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01452 294 PANTHER TRANSCRIPTION FACTOR TGA9 227 294 - -
Gma04g01452 294 ProSiteProfiles DOG1 domain profile. 168 294 IPR025422 GO:0006351|GO:0043565
Gma04g01452 294 Pfam Hyaluronan / mRNA binding family 40 74 IPR006861 -
Gma04g01452 294 Pfam Seed dormancy control 222 266 IPR025422 GO:0006351|GO:0043565
Gma04g01452 294 Coils Coil 43 70 - -
Gma04g01452 294 PANTHER FACTOR TGA7, PUTATIVE-RELATED 227 294 - -
Gma04g01452 294 Gene3D - 142 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01452 Gma-Chr4 35829177 35835225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01452 204 294 Calmodulin-binding Proteins AT1G77920 52.747 1.31e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01452 K04120 - gmx:100807519 162.155