Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01432 ATGGTTTCGGTCACATGGGAAGTGCTCATTGTTGCAGTTCTTGCCATATTGGCCTCAAAATATGTTCAGATTAGATATCAGCCAAATGCTCCATTAGTTCTTAAGGGCATCTCTTATAGGTTTAAAGAAGGGAGTAGAGTGGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTTGCTTAGTTGAGCCTACCAGAGGTGACATTCTTATTGATGGTATTAATATCTGCTCAATAGGGCTAAAAGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACTCTTTTCAAGGGCAACATTCAAAAGAACTTGGACCCTCTATGCTTGTACTCTAATAATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGCAACAATTAGTAGTCTATCAAATCTCTTGGACAGTTCTGGTGTCTTAAATTTGTGA 447 0.3803 MVSVTWEVLIVAVLAILASKYVQIRYQPNAPLVLKGISYRFKEGSRVGRTGSGKTTLISALFCLVEPTRGDILIDGINICSIGLKDLRTKLSIIPQEPTLFKGNIQKNLDPLCLYSNNEIWKALEKCQLKATISSLSNLLDSSGVLNL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01432 148 Gene3D - 16 146 IPR027417 -
Gma04g01432 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 141 IPR027417 -
Gma04g01432 148 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 23 144 - -
Gma04g01432 148 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 23 144 - -
Gma04g01432 148 Pfam ABC transporter 34 131 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01432 Gma-Chr4 34842057 34843424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01432 20 109 Calmodulin-binding Proteins AT2G36910 34.737 1.53e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01432 - - gmx:100813711 215.312