Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01428 ATGCACAACTCATGCTTCTCACCTGCATTTTCTGGCCAGAACTTGTGCGACCCAGTTCCCTTGTTTTGCCCCTGTTGCTTTATTGCTCTGCTTTCTTGCTCATTGCCCAGcaggacagatgattggcacaagatatgtggcacatgggTCTTTATTACTTCCACTCACCAACCACTGTTGCCTGTACCTCCATTTGATCTGAGAATTATACATAGAAAGAATAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGAAGGCATTATGTAACAGAATATCTTTGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGCTTGAAGATCATTAAAAATGACAAATACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTAAAACTTGTCAATAAGCATGACCCACCAGATCTACACCACTTTTTGCGCCTTTATGATTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCAAGCAAACTTGTACGAATTTCAGAAGTTCAAGCAAGAATCTGGAGGGGAAGAATATTTTACGTTGAACAAATTGCAGCTCATTACTCGCCAATGTTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAGAACATTCTAATCAAAAGTTACAGAAGATGTCAGATAAAGGTTATTGATCTAGCAGGAAGCAGTTGCTTCCAAACAGACAATTTGTGTCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTCGGCTGTATCTTGGCAGAGTTATGCTCTGGTGAAGTACTATTTCCAAATGATGCAGTTGTGATGATTCTAGCACGCATGATTGGAAT 947 0.3791 MHNSCFSPAFSGQNLCDPVPLFCPCCFIALLSCSLPSRTDDWHKICGTWVFITSTHQPLLPVPPFDLRIIHRKNRTGFEENKELPIVLNTVLAGRHYVTEYLCSAAFSRVVQAHDLQTGIDVCLKIIKNDKYFFDQSLDEIKLLKLVNKHDPPDLHHFLRLYDYFYHQEHLFIVTELLQANLYEFQKFKQESGGEEYFTLNKLQLITRQCLEALQYLHSLGIVHCDLKPENILIKSYRRCQIKVIDLAGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIG 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01428 315 Gene3D Phosphorylase Kinase; domain 1 91 177 - -
Gma04g01428 315 Pfam Protein kinase domain 106 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01428 315 PANTHER DUAL SPECIFICITY PROTEIN KINASE 66 315 - -
Gma04g01428 315 SUPERFAMILY Protein kinase-like (PK-like) 86 305 IPR011009 -
Gma04g01428 315 CDD PKc_DYRK_like 98 315 - -
Gma04g01428 315 Gene3D Transferase(Phosphotransferase) domain 1 150 313 - -
Gma04g01428 315 SMART serkin_6 97 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01428 315 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 66 315 - -
Gma04g01428 315 ProSiteProfiles Protein kinase domain profile. 96 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01428 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01428 Gma-Chr4 34799714 34801724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01428 93 315 MAP Kinase Gene Family AT5G19010 32.780 4.11e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gma04g01428 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01428 - - gsj:114410732 575.474