Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01413 ATGGAGGGAGGTGACGTTGGGCATTGGGTGTTGGAGTTCCTTCTCCGGGCTCGGTACCCAGTCGTTTCCAGTAACCTACTCAAGAAAGTCCTTCGAATAGTCCCACTTTCAGACTTTGATTCCAGGCTTCAGAAGACGCTTCTTCTCCGAACCCTTCAAGACCACTTGTTCGCTGTCTCTGTCCCCGAATCCGTTCTCGAAACCCTCGAGCTCCTCGAGGAACTTCACCGCCGCGACGACGGCGCTCTGATCACCGCCGCCGCCATGAGCGCCGCCTACTGCGCCATTGCGGTGGACTGCACTCTCAAGCACCTGCTGGTGGAACTCCACAACAACCCTGCCTACCTCGGCGCCGTGAACAGGATATGGCGTGGTAGGGTTCGGCACATGAGCGGTTCCAGGGAGGGCAGCCTTCTTCTCTCGCTGGAGTTGGAGCGGTGGAGAACCGACATCGAAACTTCCCTTCTGGACTCGTTGGTGAGGGAGAGGTTGGCCTCCATTGATACAAGAAGGGACGCCGTCGTCAAGCTCCGGGATTATTTGATGGAAGCATGGACCGATTTGGGCCCTTCGTTTCTCGAGCTAGCGGCGTTGGCGCAAATAAACAAAAATGCCCTAGCCGTGAATTACTTAGAGGATTCCCAACAGCCGGAGAGAGAAATTGAGAAGTGCACTGCTGCTCCTGCTGAGGAAGTGCATACCTCAACAGATGCCGAGGTCCAAAAGGTTGGGGAATGTGGATCTGTGGAGTTGCAAAAGTTGGCCGAGGATTCTCTACTTAATTCGTTGGAAGTGAATGAGGAGGCACCTATTGAAAGTAGAGATGCAGATGTACCTTGCCCACTTGTTATTAATAACAATAACAATGAGGCTGATCTGATGGAAAAAGATCAAACTTCTATCCCTCATAATCATGACCATAAGTCAAGTTTAATGGAAAGAAATAGTACCGCTCGCATTTATGAGTGGGACGATTCAATAGATGGCTTGGAGGATGGAACATCAGATCATGCAACTAGATTTAATTTGCCTAGCCCCAAGTGGAGAGAAGTTTCTCCATTGGATAAGTACAAACCTGCAAGCATTACAAAGAGGAGAAAAGTGAAAAAATGGAGTCAGTTGGAAGAGGAGACCCTAAAGACCGCTGTAGACAAGTTTGGCAGGGGAAATTGGAAGTTAATTCTAGATTCTCACAAGGATATATTTGAAGAGAGAACTGAAGTTGATTTAAAGGACAAGTGGAGAAACATGAGGTAA 1257 0.4916 MEGGDVGHWVLEFLLRARYPVVSSNLLKKVLRIVPLSDFDSRLQKTLLLRTLQDHLFAVSVPESVLETLELLEELHRRDDGALITAAAMSAAYCAIAVDCTLKHLLVELHNNPAYLGAVNRIWRGRVRHMSGSREGSLLLSLELERWRTDIETSLLDSLVRERLASIDTRRDAVVKLRDYLMEAWTDLGPSFLELAALAQINKNALAVNYLEDSQQPEREIEKCTAAPAEEVHTSTDAEVQKVGECGSVELQKLAEDSLLNSLEVNEEAPIESRDADVPCPLVINNNNNEADLMEKDQTSIPHNHDHKSSLMERNSTARIYEWDDSIDGLEDGTSDHATRFNLPSPKWREVSPLDKYKPASITKRRKVKKWSQLEEETLKTAVDKFGRGNWKLILDSHKDIFEERTEVDLKDKWRNMR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01413 418 ProSiteProfiles Myb-like domain profile. 363 418 IPR001005 -
Gma04g01413 418 CDD SANT_TRF 369 418 - -
Gma04g01413 418 SUPERFAMILY Homeodomain-like 365 417 IPR009057 -
Gma04g01413 418 Gene3D - 360 418 - -
Gma04g01413 418 PANTHER MYB TRANSCRIPTION FACTOR 4 417 - -
Gma04g01413 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 363 418 IPR017930 -
Gma04g01413 418 Pfam Myb-like DNA-binding domain 369 417 IPR001005 -
Gma04g01413 418 PANTHER MYB TRANSCRIPTION FACTOR 4 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01413 Gma-Chr4 32956514 32960198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01413 9 417 Single Myb Histone (SMH) Gene Family AT1G15720 27.913 2.06e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma04g01413 Myb_DNA-binding 5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01413 - K11111 gmx:100811657 785.023