Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01406 ATGCCTACAAATGAGAGCATCCATTCTTCCACGCTCGTCTTCGCTCTCCATCTGTTCAAAGATCCGTCCGTCACGAGCGTTGGTTATACGATGGATGGGAACAAGGACGACGCGTTGAAATGTTTGAGTATCGGCAAAGAGGCGTTGGAAAGCGGCGATCGGTCACGTGCGTTGAAGTTCGTAACGAAGGCACGTCGCCTCGACCCCACCCTCCCCGTCGACGATCTATTGTCCACGATAGACGCGGATGCAGGGGATCAGCCTGCCGCCGCGGAGGCGGCGGAGTCCACAAAGTCTCCCGATCAGCCTTCTATCCGCCGGAGGGCTGCTGGGGCGGCCGCTGCCGCTCCAAAGGGGCCCTCGTCGGCCTCGTCCTCTTCGGCCTCATACACAGAAGAGCAAGTCTCAATTATCAGAGAGATAAAGAGAAAGAAGAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTATTGAGGACGTGAGGAAGTCGTACAGGAAACTGTCTCTTAAGGTTCATCCCGATAAGAACAAAGCCCATGGGGCCGAGGAAGCGTTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTAGTAATGAAGAGAGTAAGAGGAAGTATGATGTTTCGGGAGAGGATGAAGCGATCTACGAGCAGCGCACTGCAAGGCCGGCAGCCAGGGGTTATAATGGTTACTATGAAGCTGATATTGATGCTGAGGAGATATTCAGGAACTTCTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGGTTCAATGGGTTCAATGGTCATAGGCATGCTGCTGAACATGGTTCTGGTGGTTTTAATGTTCGCACATTAATTCAGTTACTGCCAGTGCTGCTGATTCTACTATTGAACTTTTTGCCTTCTTCGGAGCCCTTGTACTCGCTATCGAAGAGTTATCCTTATGAACATCGGTTTACCACACCCAAGGGTGTCAACTATTATGTCAAATCTACAAACTTTGTTCAGGAGTATCCCTTGCGGAGCGAGGAACGATCAAAAATTGAAGAAAGGGTAGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCATTTTGAGTTGCAGCGTCGCCAATGGGGTTATATCCGGGAAACACCCCACTGCGATATGTTGCGGAAGTTTGAGGTGGTGAATTAA 1188 0.5 MPTNESIHSSTLVFALHLFKDPSVTSVGYTMDGNKDDALKCLSIGKEALESGDRSRALKFVTKARRLDPTLPVDDLLSTIDADAGDQPAAAEAAESTKSPDQPSIRRRAAGAAAAAPKGPSSASSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTIEDVRKSYRKLSLKVHPDKNKAHGAEEAFKAVSKAFQCLSNEESKRKYDVSGEDEAIYEQRTARPAARGYNGYYEADIDAEEIFRNFFFGGMAPAANFGGFSFGPAGFNGFNGHRHAAEHGSGGFNVRTLIQLLPVLLILLLNFLPSSEPLYSLSKSYPYEHRFTTPKGVNYYVKSTNFVQEYPLRSEERSKIEERVEREYFSILRQNCHFELQRRQWGYIRETPHCDMLRKFEVVN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01406 395 Pfam Domain of unknown function (DUF1977) 304 375 IPR015399 -
Gma04g01406 395 PANTHER - 31 393 - -
Gma04g01406 395 ProSiteProfiles dnaJ domain profile. 146 210 IPR001623 -
Gma04g01406 395 Gene3D DnaJ domain 142 256 IPR036869 -
Gma04g01406 395 MobiDBLite consensus disorder prediction 86 130 - -
Gma04g01406 395 SUPERFAMILY Chaperone J-domain 142 261 IPR036869 -
Gma04g01406 395 CDD DnaJ 146 199 IPR001623 -
Gma04g01406 395 PRINTS DnaJ domain signature 148 166 IPR001623 -
Gma04g01406 395 PRINTS DnaJ domain signature 166 181 IPR001623 -
Gma04g01406 395 PRINTS DnaJ domain signature 182 202 IPR001623 -
Gma04g01406 395 Pfam DnaJ domain 146 207 IPR001623 -
Gma04g01406 395 PANTHER AT29763P-RELATED 31 393 - -
Gma04g01406 395 SMART dnaj_3 145 202 IPR001623 -
Gma04g01406 395 ProSitePatterns Nt-dnaJ domain signature. 187 206 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01406 Gma-Chr4 32109972 32112350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01406 4 207 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 25.688 1.10e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01406 K09518 - gmx:100788812 659.833