Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01378 ATGTCAAAAGACCAGAAGCCAGATTGCATTTCGGAGAGGCTAAGGATTGAGAAACTTGGTGGAGTGGTATACGATGGATACTTGAATGGCCAGTTATCTATTTCCCGTGCCTTAGGAGACTGGCACATGAAGGGTTCCAAGGGTTCTGCCTGCCCCTTGAGTGCTGAGCCAAAGCTGCAGGAAATCAACCTGACTGAGGATGATGAGTTCTTGATTATGGGCTGCCACGACCTATGGGATGTAATGAGTAACCAATGTGCTGCAACCATGGCAAGGAAAGAATTGATGATACATAATGATCCTCAAAGGTGTTCTAGAGAGCTGGTCAGAGAGGCTCTTAAGCGTAACTCGTGCGATAATTTGACAGTTATCGTGATATGTTTCTCCCCAGATCCTCCTTCTAGGATAGAGACACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTTAAGGATGTATTAGACTGTTAG 486 0.4568 MSKDQKPDCISERLRIEKLGGVVYDGYLNGQLSISRALGDWHMKGSKGSACPLSAEPKLQEINLTEDDEFLIMGCHDLWDVMSNQCAATMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPSRIETPPSRVRRSISAEGLNLLKDVLDC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01378 161 Gene3D - 1 147 IPR036457 -
Gma04g01378 161 SUPERFAMILY PP2C-like 1 130 IPR036457 -
Gma04g01378 161 SMART PP2C_4 1 126 IPR001932 -
Gma04g01378 161 CDD PP2Cc 1 128 IPR001932 -
Gma04g01378 161 ProSiteProfiles PPM-type phosphatase domain profile. 1 128 IPR001932 -
Gma04g01378 161 Pfam Protein phosphatase 2C 1 120 IPR001932 -
Gma04g01378 161 PANTHER PROTEIN PHOSPHATASE 2C 1 150 IPR015655 GO:0004722|GO:0006470
Gma04g01378 161 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01378 Gma-Chr4 27512914 27513399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01378 1 160 PP2C-type Phosphatase Gene Family AT2G33700 81.366 2.97e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01378 K14803 - gmx:100778015 321.242