Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01362 ATGGAGCCCATGGACATCGTTGGGAAGGCCAAGGAAGACGCTTCTCTTCCTAAAGCGACAATGACGAAAATTATTAAAGAGATGTTGCCCCCGGACGTGCGTGTCGCCAGAGATGCACAGGATTTATTGATCGAGTGTTGTGTCGAGTTTATAAACCTTGTCTCGTCGGAGTCCAACGAAGTCTGTAACAAAGAAGAAAGAAGGACGATTGCACCGGAGCACGTGCTGAAGGCTTTAGGGGTTCTTGGATTTGGCGAGTACATTGAGGAAGTTTATGCAGCATATGAACAACACAAGTTGGAGACAATGCAAGACTCTTTAAAAGGTGCCAAGTGGAGCAACAGAGCTGAGATGACTGAGGAAGAAGCATTGGCTGAACAGCAAAGGATGTTTGCAGAGGCACGTGCAAGAATGAATGGAGGAGCCATTACTTCCAAGCAGCCAGACGCTCACCAAAGTTTAGAGAGCTAA 471 0.4713 MEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNKEERRTIAPEHVLKALGVLGFGEYIEEVYAAYEQHKLETMQDSLKGAKWSNRAEMTEEEALAEQQRMFAEARARMNGGAITSKQPDAHQSLES 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01362 156 Gene3D Histone, subunit A 5 143 IPR009072 GO:0046982
Gma04g01362 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Gma04g01362 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Gma04g01362 156 Coils Coil 115 135 - -
Gma04g01362 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01362 Gma-Chr4 26503787 26508190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01362 1 149 CCAAT-DR1 Transcription Factor Family AT5G23090 84.564 2.12e-92 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma04g01362 CBFD_NFYB_HMF 7.7e-23 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01362 K21751 - gmx:547635 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01362 04 26503787 26508190 Gma04g01362 04 26503787 26508190 ECH