Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01359 ATGACAAAGATGGGTGAAGATGTGAAGGTAGTTGTTCCAGAATCAGTGTTGAAGAACCGCAAGAAGGAGGAGGATTGGGCATTGGCCAAGAATGAAGAACTCGATGCTACCAAGAAGAAGAGAGCCGAGAGCCGCAAACTCATCTACAACAGAGCTAAGCATGATAAGGTCCTTGAAGTAGAGCAGAAGTACAATGAGATAAGGAAGCCAGTTTACAATAAACGAAATGATGTCGTCAAATCTATTCCTGATTTCTGGTTCACTGCTTTTATGAGTCATCCTGCCCTTTATGAACTTCTGAATGTAGAGGATCAAAAGAATGGGAACAAGTGGGCTCGTATTGATATTAGTTTCTTTAGTTGGTTTAGTGACTGTGAGCAGAAAAATGATGTGGATGAAATTCATGACGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTCACTTATTTCAACAATGTTCTGAACATCAATTGGTTTCAGAAACAACCCAATGGCAACGACGAGGTCAGCATGACAATGAATATTTCCGCAGACTTGCAGTCCCTTTTCACATGGAACACAAAACAGGTTTTTGTTTTTCTAGCTGCTAAGTATGAAACTCCTAAGAATTCCTTGAACCAGGTCACTGAGGACCGAGGAGATCACATCGATATGATGCCTGAGGAAGAGGAAGAGTATCGCGGGCTTCTACGAGACTTAGAGCCTTCGTCTAAGGAGAAGGATTGA 738 0.4173 MTKMGEDVKVVVPESVLKNRKKEEDWALAKNEELDATKKKRAESRKLIYNRAKHDKVLEVEQKYNEIRKPVYNKRNDVVKSIPDFWFTAFMSHPALYELLNVEDQKNGNKWARIDISFFSWFSDCEQKNDVDEIHDEVAELIKDDLWPNPLTYFNNVLNINWFQKQPNGNDEVSMTMNISADLQSLFTWNTKQVFVFLAAKYETPKNSLNQVTEDRGDHIDMMPEEEEEYRGLLRDLEPSSKEKD 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01359 245 Pfam Signal peptidase subunit 156 213 IPR007653 GO:0005787|GO:0006465|GO:0016021
Gma04g01359 245 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 103 159 - -
Gma04g01359 245 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 50 106 - -
Gma04g01359 245 SUPERFAMILY NAP-like 49 155 IPR037231 -
Gma04g01359 245 MobiDBLite consensus disorder prediction 221 245 - -
Gma04g01359 245 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 103 159 IPR002164 GO:0005634|GO:0006334
Gma04g01359 245 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 50 106 IPR002164 GO:0005634|GO:0006334
Gma04g01359 245 Gene3D - 17 83 - -
Gma04g01359 245 Gene3D Nucleosome assembly protein 102 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01359 Gma-Chr4 26398169 26406506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01359 9 54 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 71.739 3.18e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01359 K12948 - gmx:106798648 194.512