Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01355 ATGCTAACTATTCCTACTCCACCAAAGGTTTGTCATTTTTGCCTAACATATATATCAACTCAAATTTTGTATGGGGAAAACCCACCAAGACAAGTCATTTCAATTAGCCCAACATACAATTATGCTGCAATTCAACCATCCCAACCATATCTTGACCCAACTTCAGTTGATTATGTTACATTCGAGATGCTGATTTCGGAAACAATGGTTGGTGGGTTGATTGGCCGGTGTGGCTCAAACATATCGAGGATCAAAAATGAGTTTGGAGCAATGATTAAGAAACCAAGTACTCAAATTGCTTCAATCAATAAGGACTTCAAGAATGCAATGATGCTAAAATCAGAATCCCATCAAACCCTGCCAGAGGGATTTATTACAAACATCAATGACCAACCAAAGCCACCACCCAAAATGGAAACCACTGGAAACAACTTTTTGTTCAATAGAACTCATGGTGATGACCTCTTAATGAATCTTGACCAGTTCCAAGCCATATCAATGAAGTCGGAGGCTAACATGGAGGAGGTTGAGCAAGCTAATAGAGTAGTTGTTGAAAGCTGCCACAGGGTTCTGAGTTTGTTGTCTCAGCCAAGGGATCAGGTTCAACATAGGAATTTAATGGTGGAAACCGGTGAAACTGTGGTGAGGTTCAAGAAGGTTGTTTCCATGCTTCACAATGGTTTGGGTCATGCAAGAGTGAGGAAACTTAAAAACCCTCAAATCCCCTCTTCCCACCAAAGCATCTTCTTAGACAACCCCAATTGCAAAACCTTAACCAACAACAACAACAACAACCATCACTTAAAAAAATCTATACTTTCCCCAAATCAACTAACATCAATAATTTCAATTGTTCAAAgagaatctggtggtggaggggacctcgggggtgttgccatgcctgcatag 909 0.3729 MLTIPTPPKVCHFCLTYISTQILYGENPPRQVISISPTYNYAAIQPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIKNEFGAMIKKPSTQIASINKDFKNAMMLKSESHQTLPEGFITNINDQPKPPPKMETTGNNFLFNRTHGDDLLMNLDQFQAISMKSEANMEEVEQANRVVVESCHRVLSLLSQPRDQVQHRNLMVETGETVVRFKKVVSMLHNGLGHARVRKLKNPQIPSSHQSIFLDNPNCKTLTNNNNNNHHLKKSILSPNQLTSIISIVQRESGGGGDLGGVAMPA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01355 302 Gene3D K Homology domain, type 1 53 130 IPR036612 GO:0003723
Gma04g01355 302 SMART kh_6 57 121 IPR004087 GO:0003676
Gma04g01355 302 CDD KH-I 60 93 - -
Gma04g01355 302 ProSiteProfiles Type-1 KH domain profile. 58 93 - -
Gma04g01355 302 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 51 98 IPR036612 GO:0003723
Gma04g01355 302 Pfam KH domain 60 94 IPR004088 GO:0003723
Gma04g01355 302 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 18 94 - -
Gma04g01355 302 Coils Coil 159 179 - -
Gma04g01355 302 PANTHER POLY(RC)-BINDING PROTEIN 4-LIKE 18 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01355 Gma-Chr4 26190824 26195541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01355 173 255 WRKY Transcription Factor Family AT3G04670 51.807 4.39e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01355 - K21444 gmx:100792310 177.948