Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01333 ATGGCAGGAAACATGGGGTGGGGTGTGATAGAAGAGGAGGGATGGAGGAAGGGACCTTGGACTTCTGAGGAGGACAGATTGCTCATTCTGTATGTCAAGTTCCATGGTGAGGGCAGATGGAACTCTGCTGCTAGGCTTGCAGGACTAAAAAGAAATGGGAAGAGCTGCAGATTGAGATGGGTGAATTACCTGAGGCCAGACCTCGAGAAGGGTCAAATAACACCACAAGAAGAAAGCATAATTCTAGAGCTGCATGCTAGGTGGGGAAATAGGTGGTCAACAATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATAAAGAATTATTGGAGGACTCACTTCAAGAAAAAGATAAGGGCTCACTTCAGCTAA 375 0.464 MAGNMGWGVIEEEGWRKGPWTSEEDRLLILYVKFHGEGRWNSAARLAGLKRNGKSCRLRWVNYLRPDLEKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKIRAHFS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01333 124 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Gma04g01333 124 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Gma04g01333 124 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 120 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma04g01333 124 CDD SANT 19 64 IPR001005 -
Gma04g01333 124 PANTHER MYB TRANSCRIPTION FACTOR 1 120 - -
Gma04g01333 124 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Gma04g01333 124 Gene3D - 74 119 - -
Gma04g01333 124 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Gma04g01333 124 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Gma04g01333 124 SMART sant 69 117 IPR001005 -
Gma04g01333 124 SMART sant 16 66 IPR001005 -
Gma04g01333 124 CDD SANT 74 115 IPR001005 -
Gma04g01333 124 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Gma04g01333 124 Gene3D - 17 69 - -
Gma04g01333 124 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 64 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01333 Gma-Chr4 23786036 23786790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01333 12 121 MYB Transcription Factor Family AT3G24310 88.182 6.78e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma04g01333 Myb_DNA-binding 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01333 K09422 - gmx:100803277 269.24