Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01329 atgATTCCTGCAACTTTGGCTCATGTTGAAGCTCTAGAGGCATATACCCAGATATCTAGTCATCCCTTTCACAAAACAAACAAACAAGACATTATATCTCTTGATATCCTTTATTCTAAGGACTTAATTGCAACTGGAGGTATTGATACAAATGTTGTTATTTTTTACCGCCCATCAGGACAGATATTATCTACACTCAGCGATCACTCTAAAAAGGTTTTATTTTAG 228 0.3465 MIPATLAHVEALEAYTQISSHPFHKTNKQDIISLDILYSKDLIATGGIDTNVVIFYRPSGQILSTLSDHSKKVLF 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01329 75 PANTHER PRE-MRNA-PROCESSING FACTOR 19 2 73 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
Gma04g01329 75 SUPERFAMILY WD40 repeat-like 25 73 IPR036322 GO:0005515
Gma04g01329 75 Gene3D - 4 74 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01329 Gma-Chr4 23679806 23681218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01329 1 73 U-box Gene Family AT1G04510 72.603 7.70e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01329 K10599 - gmx:100800213 128.642