Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01294 ATGGATGGATTAGGTTCGCCATCCCAGTGGCTGAGGGAGCTGAGATGGGACTCCCAGGGCTTAAATCCAATAAGCCTTCTTATTGACTGTGCCAAATGTGTTGCATCTGGAAGCATCAAGAATGCAGATATTGGCCTTGAGTACATATATCAGATTTCATCTCCTGATGGTAATGCAGTGCAAAGGATGGTCACTTATTTCAGTGAAGCACTTGGTTACAGGATAATAAAAAATTTGCCTGGTGTATATAAGTCTCTCAATCCATCAAAAACATCATTATCTTCTGAAGATATCCTTGTTCAGAAATACTTCTATGAACTGTGTCCATTTTTGAAGTTCTCATACCTGATCACAAACCATGCCATTGCTGAGGCCATGGAGTGCGAAAAGGTGGTTCACATTATTGATCTTCACTGTTGTGAGCCAACTCAATGGATAGATCTTCTACTAACTTTCAAAAACCGTCAGGGAGGTCCACCCCATCTGAAAATTACAGGAATTCACGAGAAGAAAGAAGTATTAGACCAAATGAACTTTCATTTGACAACTGAAGCTGGGAAATTGGATTTTCCTTTGCAGTTCTATCCAGTTGTTAGCAAACTGGAAGATGTTGACTTTGAGAAGTTGCCTGTAAAGATAGGAGATGCTCTTGCAATCACTTCTGTTCTTCAGCTGCATTCTCTTCTTGCCACTGATGATGATATGGCAGGGAGGATCTCACCGGCTGCGGCAGCATCTATGAATGTGCAGAGAGCACTGCATATGGGTCAAAGGACTTTTGCAGAGTGGCTTGAGAGAGATATGATCAATGCATATACCTTGAGTCCTGATTCTGCTTTGTCACCGCTTTCCTTGGGTGCCTCACCTAAGATGGGGATCTTTCTCAATGCTATTAGAAAACTTCAACCAAAACTAGTAGTGATTACTGAACAAGAATCAAATCTGAATGGTTCCAATTTGATGGAGAGAGTTGATAGAGCATTGTACTTTTACAGTGCATTGTTTGACTGCTTGGACTCTACTGTTATGAAAACATCAGTAGAGAGGCAAAAACTTGAGAGCAAGCTTCTTGGAGAGCAGATAAAGAACATCATTGCTTGTGAGGGTGTTGATAGAAAGGAGAGACATGAGAAACTCGAGAAATGGATTCGAAGACTTGAAATGGCTGGTTTTGAAAAGGTACCTTTGAGCTACAATGGGAGGTTAGAAGCAAAGAATCTGTTGCAGAGATATAGTAATAAATACAAATTTCGAGAAGAGAATGATTGTTTACTTGTCTGCTGGAGTGACAGACCATTGTTTTCTGTATCAGCTTGGAGTTTTAGGAGATGA 1332 0.4069 MDGLGSPSQWLRELRWDSQGLNPISLLIDCAKCVASGSIKNADIGLEYIYQISSPDGNAVQRMVTYFSEALGYRIIKNLPGVYKSLNPSKTSLSSEDILVQKYFYELCPFLKFSYLITNHAIAEAMECEKVVHIIDLHCCEPTQWIDLLLTFKNRQGGPPHLKITGIHEKKEVLDQMNFHLTTEAGKLDFPLQFYPVVSKLEDVDFEKLPVKIGDALAITSVLQLHSLLATDDDMAGRISPAAAASMNVQRALHMGQRTFAEWLERDMINAYTLSPDSALSPLSLGASPKMGIFLNAIRKLQPKLVVITEQESNLNGSNLMERVDRALYFYSALFDCLDSTVMKTSVERQKLESKLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFEKVPLSYNGRLEAKNLLQRYSNKYKFREENDCLLVCWSDRPLFSVSAWSFRR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01294 443 Pfam GRAS domain family 24 439 IPR005202 -
Gma04g01294 443 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 3 441 - -
Gma04g01294 443 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 441 IPR005202 -
Gma04g01294 443 ProSiteProfiles GRAS family profile. 14 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01294 Gma-Chr4 21575687 21577126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01294 6 443 GRAS Transcription Factor Family AT1G50420 50.673 2.06e-151 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma04g01294 GRAS 2.8e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01294 - - gmx:106798410 881.708