Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01281 ATGGGTATGGCTGCAGAGGCTCAGTTTCATGTTCTGGCTGTTGATGACAGCCTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCCTTTCATGTTACTGCTTTGGACTCTGGTAGTAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGATGAGCAGAGAAATAAAGAGCCTCCCTCTATTGCTCTAGAATCCCATCAGGATGTAGAAGTAAACCTGATCATAACTGATTACTGTATGCCAGAAATGACAGGCTATGATCTGCTGAAAAAGATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCAGCAAGGATCAACAGATGCCTAGAAGATGGAGCTGATGAATTCTTTTTGAAACCAGTTCAACAGTCAGATGTAAACAAGCTGAGGCCACATTTGTTGAAATCAAAAGTTAAGGATGAAGAAGTCCAACAAATCAACAAAAAAAAGGAAGGAAACAGAAGAAAGCCATTCACCAGATAA 519 0.4008 MGMAAEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLVEDEQRNKEPPSIALESHQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADEFFLKPVQQSDVNKLRPHLLKSKVKDEEVQQINKKKEGNRRKPFTR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01281 172 Gene3D - 10 170 - -
Gma04g01281 172 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Gma04g01281 172 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Gma04g01281 172 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 162 - -
Gma04g01281 172 MobiDBLite consensus disorder prediction 152 172 - -
Gma04g01281 172 CDD REC_typeA_ARR 11 141 - -
Gma04g01281 172 SMART REC_2 9 142 IPR001789 GO:0000160
Gma04g01281 172 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 162 IPR045279 GO:0009736
Gma04g01281 172 SUPERFAMILY CheY-like 9 147 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01281 Gma-Chr4 20869615 20871371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01281 1 158 Response Regulator Gene Family AT3G57040 68.125 1.98e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma04g01281 Response_reg 3.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01281 K14492 - gmx:100818762 335.109