Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01272 ATGAAGATTTTGTTTCATTTTTCAAGAGAGCAAAGGTCGAAGGTGAAGCTAATATATCATACATATGTTCACAATTCTATCAAGCACCAGGACTTATATTTGGGGCCACAGAGTATACAAAGTTCGATTGATATGTGGTCAACTGGATGTGTTCTTGCTGAACTTCTTTTGGGCCAACCATTATTCCCTGGCGAAAATGCAATAGACCAGCTTGAACATATTATAAAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCATAAGCTATTGA 297 0.3805 MKILFHFSREQRSKVKLIYHTYVHNSIKHQDLYLGPQSIQSSIDMWSTGCVLAELLLGQPLFPGENAIDQLEHIIKVSTDKSTPMAQDIPQKDASISY 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01272 98 Pfam Protein kinase domain 34 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g01272 98 Gene3D Transferase(Phosphotransferase) domain 1 32 93 - -
Gma04g01272 98 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 28 79 - -
Gma04g01272 98 SUPERFAMILY Protein kinase-like (PK-like) 32 77 IPR011009 -
Gma04g01272 98 PANTHER SHAGGY-RELATED PROTEIN KINASE DELTA-RELATED 28 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01272 Gma-Chr4 20039501 20041800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01272 42 72 MAP Kinase Gene Family AT2G01450 64.516 7.59e-11 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma04g01272 Pkinase 3.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01272 K14502 - gmx:100810085 75.0997