Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01267 ATGGACACCAAGCTTCTAACAATCCGCACCCTCGTCTCATCCCTCAGTTCCTCCTCCGACCAAACCCGCCTGGCCGCCCTCCGCCACCTACGCCGCACCTCCGCCGAAGACCCCGCCGCTCGCCCCCTCATTTCCGCCGCAGGCGCCGTCCCTCTCCTCGCCTCCGCCCTCTACTCCCCCTCCCACCCCATCcAGGACCACGCCGCCGCCACCCTCCTCAACCTCTCCATCTCCGACCGTCGCCCCCTCGCCGCCTCCCACGCCCTCCCGGACGCCCTCGCCCACCTCCTCTCCCGCCACGCCACCTCCTCCGCTGCCTCCGCCGTCCAGTCCGCCGCCGCCACCCTCCACAGCCTCCTCGCCGTCGTCTCCGAGTTCCGCCCCATAATCACCTCTAAACCCGACATCATCCGGGCCCTCGTCGGTATAATCAGTCACTCTGATTCCCCGACGAGGTCCATAAAGGATGCCCTCAAGGCATGCTTTGGAGTAGCCCTCCACCCGCCGAGCCGGATTGTACTAATCCGGCTCGGCGCGGTTCCTGCGCTCTTCGCTCTCGTAGCCAAGGGCAAGGACGGAAATAGGAGGGCTGGCATAATCGAGGACGCCACTGCTGTGATCGCGCAGGTGGCGGCCTGTGAGGAGAGCGAGGAGGCGTTTCGGAAGGTGTCGGGGGTTTCGGTGTTAACGATGATGTTGAGTTCGGAGAGTGGGAGCTGCAGTTTGAGGACGAAGGAGAATGCTGTTGCGGCGTTGTTGAATTTGGTGAGGTGTGGGAGTGAGAGGGTTTTTCGGGAGGTTAGAGACAAAGTTGGGGGCTTGGATGGGATCGCGTACGTGCAGGAACACGGTAGCCCCAAAGGGAAGAGCAAAGCCGTGGCGTTTTTTAAGCTTTTGCTTGATGGTGGAAGCAGTGGTGAAGTTGTTCAAGATTTGTATCCCGTTGATCCAGAATCGGGTTCAAGCTGTAGTGGGTAA 978 0.6166 MDTKLLTIRTLVSSLSSSSDQTRLAALRHLRRTSAEDPAARPLISAAGAVPLLASALYSPSHPIQDHAAATLLNLSISDRRPLAASHALPDALAHLLSRHATSSAASAVQSAAATLHSLLAVVSEFRPIITSKPDIIRALVGIISHSDSPTRSIKDALKACFGVALHPPSRIVLIRLGAVPALFALVAKGKDGNRRAGIIEDATAVIAQVAACEESEEAFRKVSGVSVLTMMLSSESGSCSLRTKENAVAALLNLVRCGSERVFREVRDKVGGLDGIAYVQEHGSPKGKSKAVAFFKLLLDGGSSGEVVQDLYPVDPESGSSCSG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01267 325 SUPERFAMILY ARM repeat 7 304 IPR016024 -
Gma04g01267 325 Gene3D - 3 306 IPR011989 -
Gma04g01267 325 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 178 225 IPR000225 GO:0005515
Gma04g01267 325 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 48 76 IPR000225 GO:0005515
Gma04g01267 325 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 306 - -
Gma04g01267 325 PANTHER U BOX DOMAIN-CONTAINING 2 306 - -
Gma04g01267 325 SMART arm_5 37 77 IPR000225 GO:0005515
Gma04g01267 325 SMART arm_5 167 212 IPR000225 GO:0005515
Gma04g01267 325 SMART arm_5 213 257 IPR000225 GO:0005515
Gma04g01267 325 Pfam Armadillo/beta-catenin-like repeat 40 76 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01267 Gma-Chr4 19917269 19918823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01267 8 299 U-box Gene Family AT2G23140 31.293 1.39e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01267 - - gmx:100803111 580.867