Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01259 ATGAAGCATCTCAATCTCGATTTTCAGCTCATTACTAATGAAAATGGTAAAAGGAAGTTGAAGATTGATGCTTGGTTTGGTTCTCGGAAAACATCTGTCGCCATTCGCACCGCCCTAAGCCACGTCGAGAATCTGATCACCGACGTTACCAAGGGCTACCGTTACAAGATGAGGTTCGTGTATGCTCACTTTCCAATCGACGCTAGCATTGGCAACAACAAGTTTATTGAAATTGTGTTATTAGGTTTAGTTATTGATTTGGTTACTAAATGTATTATCATTAGGCCTTTGGTTGAAATACATAGAGCAATAAGAATGCATGAGAGAAAAATTAAGAAATTTGTGGCAAAGAAAAACCTTGAATGTGCAAATAGGTTGCGCGAGAAAACACCCAAACCCAAGATCAATAGGATTATTCGGCAGAGGTACCTGAGAATTGTGGATGCACTCAGAGAATTGGATGACTGTCTTACAATGGCTGAGGTTGAGGACCAAACTATAACATGGTTAACTCCTCATTCACTACAACAGGTTGTATCTGATGATTTTGACATCACTACCATGCTAAACTTTCTGCAATTGTATGAGCAATGTGTTGTATTGCCAGTGGGTTTCAAATCCTTACATTGCTTGATTTATGTAAGAGGAGGCATTCGGGCAGCGGCTTGTGATGATGTCAGTGATCTTTTGCCAATAGGTTGCCTTCAGGTTGCCACATTGTga 723 0.4011 MKHLNLDFQLITNENGKRKLKIDAWFGSRKTSVAIRTALSHVENLITDVTKGYRYKMRFVYAHFPIDASIGNNKFIEIVLLGLVIDLVTKCIIIRPLVEIHRAIRMHERKIKKFVAKKNLECANRLREKTPKPKINRIIRQRYLRIVDALRELDDCLTMAEVEDQTITWLTPHSLQQVVSDDFDITTMLNFLQLYEQCVVLPVGFKSLHCLIYVRGGIRAAACDDVSDLLPIGCLQVATL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01259 240 Gene3D - 1 53 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma04g01259 240 Gene3D - 54 82 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gma04g01259 240 Pfam Pescadillo N-terminus 95 159 IPR010613 GO:0005730|GO:0042254
Gma04g01259 240 Pfam Pescadillo N-terminus 160 199 IPR010613 GO:0005730|GO:0042254
Gma04g01259 240 PANTHER 60S RIBOSOMAL PROTEIN L9-LIKE 1 78 - -
Gma04g01259 240 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 78 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01259 Gma-Chr4 19110404 19113885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01259 1 78 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 75.000 1.86e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01259 K02940 - gmx:100306058 142.895