Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01250 ATGGCATTCAGCGATAAGCAAAAGCAAGAAGAAGAAGAAGAACCGCACAGAATGGAAGAAGACGACGACGAAAGCgaagaagaagaagaagaagaagaagaagaagaagaagaagTGTGGGACGATTGGGAAGGAGAAGACGAAGGAGAGAGAGAATCTGAATTCGTGTGTCTATTCTGTGACTCCCGGTACAGTTCGTGCGGTTCCTTGTTCGACCACTGCGCCTCCCTTCACCGCTTTGTTTTCCACACGATCAGAACAACTCTCAGCTTGGATTTCTATGCCTCCTTCAAGCTCATTAACTTCATCCGCTCTCGGGTGGCAGAGAACATATGTTGGAGTTGTGGATTAACATGCCAGTCCAACTGTGACCTTCAGAATCATTTGCATGATGTAGTTGACTTTAATGAGATAAAGACTTTGTGGAATGATGATAGGTATCTGATACCTTTCATGCAAGATGATTCACTGTTGTACAGTTTTGGTGATTGTGACGAAGACGGGGAAGATGAACATATTACTCGAATTGATGAAGATCTTATAAAGGATCTAATGAACATTGAAGAGAGTATCCATGACGATCAAGATCTTGTGAAAAAAGTGGTAGTTGATGATGACAAACATGAGATTGATTCTGTCTCTAATAATCATTTGAACAAGGCTAGTTCTTCAAAGAAACTTATTAATGGTAAGGACTCAAAAGGACATGTTTTGTGCAGTGATAAGGATCCAGAAGGACATTTGATGGTTAATTCTCAAAATCACATTGCAAAGCATATTAAGAAGATCAATGAAAGTTATTTTGGGTCTTACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGCCAAGCGATTTTGAAGAATCCCTCTCTACTAAATAGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATTCTCAGCCTATTTTCAGCAAAAGCTGGCGCTTCAAGGGTTATTGCAGTTGAGGCTAGTGCCAAGATGGCAGCAGTAGCATCTCAGGTTGCAAAAGATAATGGTCTTTTGCTGAGTAAAAGCCAAAATGGAGTTGATGGCCTCCAAAAGGGAGTCATAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCGCAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGAGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGATACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCTTTTTGGGAAAATGTGTGTGATTTCGACATGTCTTGCATTGGGAATGAGCTTGTCATAGATGCTGCCCGAATTCCTATAGTTGATGTTGTGGACTCTCAAGATTTAGTTACCTGTTCTGCTATTCTTCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTACTTCTGGAACATGCTGCTGGTGTTATGGTGTTGTCCTATGGTTTGATACTGGATTTTCAAGCAGATTCTGCCGAGAAACACCAGCCGTGTTATCCACATCCCCTTACATGCCAAGAACACATTGGTCACAAACAATCTTAACCTTTCAAGAACCTATTGCGATGGGATTTGGAAAAGAAAACAGGGGTAAACCAGAAGCAATTGGCACTGAGGTGTATCCTGCTGTGAAGATTGATTTACGTGTCAGCATTGTCCGTTCTACTGAGCATCGCAGCATTGATATATCCTTAGAAGCTGCTGGTGTTGGTCCTGACAGTCACAAACGCAGTTGGCCTGCTCAGCTTTTTAATCTGCAGTAG 1893 0.4115 MAFSDKQKQEEEEEPHRMEEDDDESEEEEEEEEEEEEEVWDDWEGEDEGERESEFVCLFCDSRYSSCGSLFDHCASLHRFVFHTIRTTLSLDFYASFKLINFIRSRVAENICWSCGLTCQSNCDLQNHLHDVVDFNEIKTLWNDDRYLIPFMQDDSLLYSFGDCDEDGEDEHITRIDEDLIKDLMNIEESIHDDQDLVKKVVVDDDKHEIDSVSNNHLNKASSSKKLINGKDSKGHVLCSDKDPEGHLMVNSQNHIAKHIKKINESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNSAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQVAKDNGLLLSKSQNGVDGLQKGVIEVVHGMVEEIDKTVELQPRSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWENVCDFDMSCIGNELVIDAARIPIVDVVDSQDLVTCSAILQSFDLATMKPNEVDFTATATLELKPSTSGTCCWCYGVVLWFDTGFSSRFCRETPAVLSTSPYMPRTHWSQTILTFQEPIAMGFGKENRGKPEAIGTEVYPAVKIDLRVSIVRSTEHRSIDISLEAAGVGPDSHKRSWPAQLFNLQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01250 630 Coils Coil 16 38 - -
Gma04g01250 630 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 270 571 IPR029063 -
Gma04g01250 630 ProSitePatterns Zinc finger C2H2 type domain signature. 57 78 IPR013087 -
Gma04g01250 630 Gene3D Vaccinia Virus protein VP39 256 425 IPR029063 -
Gma04g01250 630 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 29 629 - -
Gma04g01250 630 MobiDBLite consensus disorder prediction 1 47 - -
Gma04g01250 630 Pfam Methyltransferase domain 306 421 IPR041698 -
Gma04g01250 630 CDD AdoMet_MTases 306 424 - -
Gma04g01250 630 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 264 582 IPR025799 GO:0016274|GO:0018216
Gma04g01250 630 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 29 629 IPR025799 GO:0016274|GO:0018216
Gma04g01250 630 MobiDBLite consensus disorder prediction 15 47 - -
Gma04g01250 630 SUPERFAMILY beta-beta-alpha zinc fingers 35 174 IPR036236 -
Gma04g01250 630 Gene3D - 427 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01250 Gma-Chr4 18899094 18903984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01250 28 629 C2H2 Transcription Factor Family AT3G12270 55.609 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01250 K11436 - gmx:100781879 1174.84