Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01245 ATGGGTGCAAAGGGCACAAAAGAAGAAGGAAATCAGTGTAGAGGGAAGAGGGTTCAAAGGAGAAGGAAATGGAGggtgcctaaatcagtggtggataagctgGTGTTTTCTTTTGATGTTGTGGATTCTGATGGTGGAGAAATTGGGGCAACTTGCTTCAATGCTGTGGCTGATCAATTCTACAATGTTATCGAAGCTGGTAAGGTATCATTGAAGCTGGAACTTAGCAAAAGGCTTGATGAGTTTGCTAAAGTAAAAGGATGGGATCAATATCACAGTCCCAGAAATCTTCTTTTAGCTCTTGTGGGAGAGCTTTCTGAGATCTTACAGTGGAAAGGAGAGGTTGCAAAGGGATTGCCCAATTGGAGTTCTGATGATAAGGAGCACTTAGAGGAAGAACTTTCAGATGTTTTGCTTTATTTAGTGCATCTTGCTGATGTTTGTGGGCTAGATCTTGGACAAGCTGCTCTGACTAAAATAGTGAAGAATGCTCATAAATACCCAGTTACTAGTACTAATTACACCAACAATTCCACTTACAACTAG 546 0.3864 MGAKGTKEEGNQCRGKRVQRRRKWRVPKSVVDKLVFSFDVVDSDGGEIGATCFNAVADQFYNVIEAGKVSLKLELSKRLDEFAKVKGWDQYHSPRNLLLALVGELSEILQWKGEVAKGLPNWSSDDKEHLEEELSDVLLYLVHLADVCGLDLGQAALTKIVKNAHKYPVTSTNYTNNSTYN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01245 181 Gene3D - 70 173 - -
Gma04g01245 181 PANTHER - 67 174 - -
Gma04g01245 181 MobiDBLite consensus disorder prediction 1 20 - -
Gma04g01245 181 CDD NTP-PPase_RS21-C6_like 77 163 IPR025984 GO:0009143|GO:0047429
Gma04g01245 181 Gene3D - 12 69 IPR012340 -
Gma04g01245 181 SUPERFAMILY all-alpha NTP pyrophosphatases 73 171 - -
Gma04g01245 181 Pfam MazG-like family 107 173 IPR025984 GO:0009143|GO:0047429
Gma04g01245 181 PANTHER DCTP PYROPHOSPHATASE 1 67 174 - -
Gma04g01245 181 SUPERFAMILY Nucleic acid-binding proteins 24 69 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01245 Gma-Chr4 18679479 18683020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01245 32 71 Core DNA Replication Machinery Family AT2G06510 65.000 5.98e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01245 K16904 - gmx:100784040 198.364