Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01242 ATGACACAAGAAAAAGATTTGTATAAATGGCATGGAAATCTTTTTGGTGGCCAAAATTGTAAACAGCCCCAAGGGTCGTCGTCATCATCAATACCAACAATGGAGGAAGATATTGACAAAGCTGCTGAAGCACTCGTTTCTTTGGTAACTTCATACCAAGAGGGAAAACATAATTTGCCACCACACGAGAACCTCAGAGACTATATTTTAGAGTATGGTGAGCCTCTCAAAAAGGTATTGACAAATACTGATGTGAATGTAAATCAAAATAGGATTTTTCTCAAAAAAGAGCATGTGGAAAAGTCTTTCTTACCGTTATTGAGGAATGATGAAAATATTGAAGAAGGAATACGAGTCTGTGCCTATGACATGCATGACAATAGTTACACTCTAATGTTCAAGAAATGGACAAAGAAGTTTTATGTGCTTAACGGTGAGTGGAAAAAATTCTTCCAAATTCATGAATTGCAAAAGAACGATGTTGTCACGGTGTGGATATTTCGTCATTCAAAAAGCAACAAGGTATGTTTCGCTCTTGCATATCAAAAGATTGAAAGGTAA 561 0.3619 MTQEKDLYKWHGNLFGGQNCKQPQGSSSSSIPTMEEDIDKAAEALVSLVTSYQEGKHNLPPHENLRDYILEYGEPLKKVLTNTDVNVNQNRIFLKKEHVEKSFLPLLRNDENIEEGIRVCAYDMHDNSYTLMFKKWTKKFYVLNGEWKKFFQIHELQKNDVVTVWIFRHSKSNKVCFALAYQKIER 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01242 186 CDD B3_DNA 76 173 IPR003340 GO:0003677
Gma04g01242 186 ProSiteProfiles B3 DNA-binding domain profile. 77 183 IPR003340 GO:0003677
Gma04g01242 186 PANTHER B3 DOMAIN PLANT PROTEIN 40 185 - -
Gma04g01242 186 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 40 185 IPR005508 GO:0003677
Gma04g01242 186 SUPERFAMILY DNA-binding pseudobarrel domain 77 172 IPR015300 -
Gma04g01242 186 Gene3D - 74 182 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01242 72 183 B3 DNA Binding Superfamily AT4G03170 39.474 5.75e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01242 - - gmx:121174747 389.808