Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01234 ATGTCTGTGAAGGAAGGCAGAGGCAGTCTACTTATACAGACATATTTGCTTGAAAGCTCCTGTGTTTGTCAACTTTCAGATCCTGAAAGAAATTACCATTGCTTTTACCTTCTCTGTGTAGCACTAGCTAAGGCTATTTTTAGGGTTATTGTAGCAATTTTGCACCTTGGAAATGTTGAATTTTCCAAAGGAGAGGAGATTGACTCTTCTGTCATCAAGGATGAGAAGTCTAGGTTCCATCTTAATGTAACTGATGAACTTCTAATGTGTGATTGTAAGAGCTTGGAAGATGCACTAATCAAGCGTGTGATGGTAACGATAGAGGAGGTTATTACAAGAACCCTTGATCCTGTTGCAGCTCTTGGTAGCAGGGATGCATTAGCTAAAACTATTTATTCCTGTTTATTTGATTGGTTGGTTGAGAAGATTAACAATTCGATTAGGCAAGATCCTAATTCAAAATCTATTATTGGAGTTCTTGATATCTATGGGTTTGAAAATTTTAAGTTCCATAAGTAA 519 0.368 MSVKEGRGSLLIQTYLLESSCVCQLSDPERNYHCFYLLCVALAKAIFRVIVAILHLGNVEFSKGEEIDSSVIKDEKSRFHLNVTDELLMCDCKSLEDALIKRVMVTIEEVITRTLDPVAALGSRDALAKTIYSCLFDWLVEKINNSIRQDPNSKSIIGVLDIYGFENFKFHK 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01234 172 PANTHER MYOSIN 44 170 - -
Gma04g01234 172 PANTHER MYOSIN 12 42 - -
Gma04g01234 172 SMART MYSc_2a 1 172 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g01234 172 ProSiteProfiles Myosin motor domain profile. 1 172 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g01234 172 Pfam Myosin head (motor domain) 44 170 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g01234 172 Gene3D - 30 42 - -
Gma04g01234 172 Gene3D Myosin VI head, motor domain, U50 subdomain 45 171 - -
Gma04g01234 172 Gene3D Kinesin motor domain 12 29 IPR036961 -
Gma04g01234 172 PANTHER MYOSIN-17 44 170 - -
Gma04g01234 172 PANTHER MYOSIN-17 12 42 - -
Gma04g01234 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 170 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01234 Gma-Chr4 18453525 18454896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01234 12 171 Myosins gene family AT5G20490 59.716 5.97e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01234 K10357 - gmx:100804820 261.536